Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1576 ATGGCCTTACAGAACATTGGTGCTTCAAATCGTGATGATGCCTTCTATAGGTACAAGATGCCAAAAATGATAACCAAGATTGAAGGTAGAGGAAATGGCATCAGGACTAATGCTGTTAGCATGGTTAACATTGCAAAGACCCTGGCTAGACCTGCAGTTTACACTACAAAGTATTTTGGTTGTGAGCTTGGAGCCCACTCAAAATTTGATGGAGGATTACAAATGTTTTTATTGCATGCTTTAGAATCTTTTTGTGGGAAAGCAAACAGAGAGGCAGTGAAGGAGGCTGCATTAATCTTGAAGGAGCTCTATGATTGTGATGTGTTGTATACTTCAATGGTATGGTATTGGCAAGGCTCAGTTAGCAACAACAAGAGTTCACAAATCTGGAAGGATGTCAAACCCTTCATTGAATGGCTTGAAAATGCTAAGTCTGAATCTGAGGAAAAATAA 453 0.3951 MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIRTNAVSMVNIAKTLARPAVYTTKYFGCELGAHSKFDGGLQMFLLHALESFCGKANREAVKEAALILKELYDCDVLYTSMVWYWQGSVSNNKSSQIWKDVKPFIEWLENAKSESEEK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1576 150 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 74 149 IPR045196 GO:0003743|GO:0006413
Glsi05g1576 150 Pfam Domain found in IF2B/IF5 11 77 IPR002735 GO:0003743|GO:0006413
Glsi05g1576 150 ProSiteProfiles W2 domain profile. 1 150 IPR003307 GO:0005515
Glsi05g1576 150 SMART 542_3 61 146 IPR003307 GO:0005515
Glsi05g1576 150 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 74 IPR016189 GO:0003743|GO:0006413
Glsi05g1576 150 Pfam eIF4-gamma/eIF5/eIF2-epsilon 74 149 IPR003307 GO:0005515
Glsi05g1576 150 SUPERFAMILY ARM repeat 69 143 IPR016024 -
Glsi05g1576 150 SMART eIF2Bneu4 15 109 IPR002735 GO:0003743|GO:0006413
Glsi05g1576 150 Gene3D - 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1576 Glsi-ChrGlsi05 64163900 64164352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1576 1 70 Eukaryotic Initiation Factors Gene Family AT1G36730 85.714 2.21e-39 135