Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1565 ATGGAGTTGAGCTTGGATTTGAGTTTGTCTTTTGTTCCCAAAACCATTTGTGAGTTTCTGGGTGAGGTTTCTAGAAGCAGAGATAGGTATGAGAAATTAACGATGCTTGATGATTTTGTGAAAAGATTGGAAGGTGAAATGAAGAAGATCGAGGCCTTTAAACGCGAGCTGCCTCTTTGCATGCTCCTCGTTAACGATGCTATAACGAGGTTGAAGAAGGAAAAAGTGCGGTGTACGGAAATGCAAGATCGATCTGAGATTGAAGAATTCATACCACTGAAAGTAAATTCTGGAGAAAATGGACAATTAACTATGGAGAGGGATAGCTGTGACAAGAAGAACTGGATGAGCTCTGCTCAGCTGTGGAGCACTGAAACCAAATTGAGAAGTGCAGAAGATGATCGGTCGGTGCCCGACAACCCAATTCAATCACGGAATCAGAAAAACCGGGGAGGAGCATTTGTCCCATTCAATGGAAATTTGTGCATGACAAAGCCAGCGACGAAGGAAGACAAGGAAGTTTCACAAGTTCCTAGCCTTACCTTGATGATTCCAGCATCTGAACTGAATCACACTAATCCAAAAGCTGGTAGCAGAGGTAGCTCCGGTTCGTCTTTCCTGACAGGCCCAGTTGAGACACAGGGCCAACCACAGCCGCCGCCGCATATGCAACAGACTCCTAGGAAACAAAGACGATGCTGGTCGCCTGAGCTTCATCGACGTTTCGTTGATGCGCTTCAACATTTGGGAGGAGCACAAGTGGCTACTCCTAAACAGATCAGAGAATTAATGCAGGTGGAAGGCCTGACAAATGACGAAGTGAAAAGCCATTTGCAAAAGTACAGACTTCATGTTAGAAGACTTCCAATTTCCTCGGTTGGTCAAGCGAATGGCCCATGGATGGTGGAAGATCAATGTGGAGATAAATCAAAGATAAACTTGTCGCAGTCTGGTTCTCCACAAGGTCCTCTCGTCCTAGGAGGGTCTGCTAAGGGTCTCTCGAGCTCTGGAGAGGCAGAAGAAGATGAGAAATCAGATTGCCAGAGTTGGAAAGACTTTAACTCCGTTCCTTCTGTTTGTGCTCTAATATCTGACTTTGAGCTTGAGTGTCAGTCAGGAAATATGAAAGAAATTGTAACTATCCAAGTTGGCGATTTTGCGAACTTCGTTGGTTCTCACTTCTGGAACTTTCAGGATGAGTTGCTGGGGTTGGCTGGGGACCTCCATGGCGATCCAGTCTTCAAGAGTCAGGATCTTAACATGGATGTGCTTTACCGTACTGGTGAGACACAACAGGGCATCCTTACATATACTCCTCGCCTAGTTTCAATAAACTTGAAAGGATCCCTTGGATCAATGAGTTCACGTGGTTCATTGTATAATGAGGCTGCACCCAATGCATCAGACGTGATCACCTGGACTGGTAAGGTTTCCACCCATGCCTCTGAACATCACAAAAAAAATTTGTTCTTGCAAAGTCTTTATGAAGAAGAGAAAAATTTGAATATGCCAAATGAGACCAGTGGTGGGGATCACAGTTCTCAAAGAGATTATCAGGATAAGGATATAGTTGAATCCCTAGAAAATGGTGTACAATTTTGGACAGACTACTCAAAAGTACATTATCACCCACAAAGTCTATATGAATTAAGTGGAGTTTGGATGGATGTTGGGAAATTTGACAATTATGGAATTGGAAGGGATTCCTTTGCGTGGGCTTCACAAGGGGAAGAAATCAGTGACAGGCTTCGATTTTTTGTTGAAGAGTGTGACCATATACAGGGGATTCAATTCATTGTTGATGACTCAGGAGGTTTCTCTGCTGTGGCTGTGGAGTTTTTAGAGAATCTTGAAGATGAATACACAAACACTCCTGTCTTGCTGTATGCTGTCCGAGGTCCAGGTTCACTCACAAGTGTTCAGAGCAGGAAGCGTACTATCTCAGGGGATCTTCACGATGCTATATCATTTTCAAGACTATCATCCTACTGCAAACTTATCGTGCCAGTTGGTCTACCCTCCTTAAGTAAAAGTAAAGCTTCCAAATTCCTCCACATTGAAGATGAGAAGCCTTACCACTCAAGTTCAGTTTATGCTGCTGCTCTCCACTCCCTTAGTCTTCCTTTCCGAATGGCACCAGTTGGGCCTACTACAAATGCATGTTCTTTTTCTGGGGCTATGGATATTAATGGAGTCATACAAATGTTATCAGGACAAGCAAGGCAGAATATGGTGTCAATTTTGGATGTTGCCATGCCAGCACCTGCTTTGACTGGAGAGAATGAACAATCTTTGTTAAAGAATTTGCAGCCTTTGACACCACAAGTAGCAGAGGATGGTGAAGACATGCAGGCAGTCGAATACATGACAGTCCATGGAGCTCTTGCATCAGAAGGTCATCGCGCGTCAGTTTGTGAAGTAAAGGATATAATCCATGCTGCTTTTGAACGTGCCAATATAAGGCCAATGTTCTGCCATTTATCTGTTGCTCTTTGTCCCCTTCCTATTCCCTTGCCTTTTCCATCAATATTTGGGAACGTTGTTGGCCAGCATGGTGAACTGATGGGTGGTCAGATTGAATCATCATGGAAGGGATCACTTGATGTCCATTCCATCCCCATGGCTGCCAGATTACGTTCCAACAGTGCTGTCTTACCTTTTTTGGAGACTAGATTGCGAAACCTACGCCGGTTTGGAATTGAGCGAGGAGCACTTGGGGCACAGTTACTTAGAAGTTGGGGCTTTGGAAAGGAGGAATTAGAAGAAATGGAAGAGGAGTTGTCTAAAATGGTTGCAGCGTTGTGTCCTCCTCAGATATCATCCGATTCAGATTAG 2835 0.442 MELSLDLSLSFVPKTICEFLGEVSRSRDRYEKLTMLDDFVKRLEGEMKKIEAFKRELPLCMLLVNDAITRLKKEKVRCTEMQDRSEIEEFIPLKVNSGENGQLTMERDSCDKKNWMSSAQLWSTETKLRSAEDDRSVPDNPIQSRNQKNRGGAFVPFNGNLCMTKPATKEDKEVSQVPSLTLMIPASELNHTNPKAGSRGSSGSSFLTGPVETQGQPQPPPHMQQTPRKQRRCWSPELHRRFVDALQHLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRLPISSVGQANGPWMVEDQCGDKSKINLSQSGSPQGPLVLGGSAKGLSSSGEAEEDEKSDCQSWKDFNSVPSVCALISDFELECQSGNMKEIVTIQVGDFANFVGSHFWNFQDELLGLAGDLHGDPVFKSQDLNMDVLYRTGETQQGILTYTPRLVSINLKGSLGSMSSRGSLYNEAAPNASDVITWTGKVSTHASEHHKKNLFLQSLYEEEKNLNMPNETSGGDHSSQRDYQDKDIVESLENGVQFWTDYSKVHYHPQSLYELSGVWMDVGKFDNYGIGRDSFAWASQGEEISDRLRFFVEECDHIQGIQFIVDDSGGFSAVAVEFLENLEDEYTNTPVLLYAVRGPGSLTSVQSRKRTISGDLHDAISFSRLSSYCKLIVPVGLPSLSKSKASKFLHIEDEKPYHSSSVYAAALHSLSLPFRMAPVGPTTNACSFSGAMDINGVIQMLSGQARQNMVSILDVAMPAPALTGENEQSLLKNLQPLTPQVAEDGEDMQAVEYMTVHGALASEGHRASVCEVKDIIHAAFERANIRPMFCHLSVALCPLPIPLPFPSIFGNVVGQHGELMGGQIESSWKGSLDVHSIPMAARLRSNSAVLPFLETRLRNLRRFGIERGALGAQLLRSWGFGKEELEEMEEELSKMVAALCPPQISSDSD 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1565 944 MobiDBLite consensus disorder prediction 185 213 - -
Glsi05g1565 944 Pfam Myb-like DNA-binding domain 231 282 IPR001005 -
Glsi05g1565 944 CDD misato 376 916 - -
Glsi05g1565 944 Pfam Tubulin domain 529 710 IPR029209 -
Glsi05g1565 944 PANTHER MITOCHONDRIAL DISTRIBUTION REGULATOR MISATO 375 944 - -
Glsi05g1565 944 MobiDBLite consensus disorder prediction 126 153 - -
Glsi05g1565 944 SUPERFAMILY Tubulin nucleotide-binding domain-like 375 711 IPR036525 -
Glsi05g1565 944 Coils Coil 36 56 - -
Glsi05g1565 944 Gene3D Tubulin/FtsZ, GTPase domain 373 737 IPR036525 -
Glsi05g1565 944 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 286 IPR017930 -
Glsi05g1565 944 MobiDBLite consensus disorder prediction 311 348 - -
Glsi05g1565 944 Pfam Misato Segment II tubulin-like domain 376 495 IPR019605 -
Glsi05g1565 944 NCBIfam myb-like DNA-binding domain, SHAQKYF class 229 284 IPR006447 GO:0003677
Glsi05g1565 944 Gene3D - 228 285 - -
Glsi05g1565 944 FunFam Myb family transcription factor 228 286 - -
Glsi05g1565 944 SUPERFAMILY Homeodomain-like 226 287 IPR009057 -
Glsi05g1565 944 MobiDBLite consensus disorder prediction 185 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1565 Glsi-ChrGlsi05 64055161 64067561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1565 1 279 G2-like Transcription Factor Family AT4G37180 42.606 8.66e-57 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi05g1565 Tubulin_3 5.6e-24 CL0566