Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1560 ATGGCAGGTATGGTTAGAGATGCTGCTGTGGGAGCTGGATTTGGGGAGTTGCTGAAAAGGGCGTTGGAAATGGTCGAAAAGGCTCTCGAATTTAAAAACACCCGACAGAAACTAAGAACCACCGTGCAGGGTATGACTCCACTGATCCAGGAGATGAAAACATTTAACGAGGGCTTGGATCGCCCTCAGGAAGGAGTAGAAAGGGTGATCACAGAACTGGAAGCGTGCGAACAGCTTCTTCGCAAGTACGCCAACGTCCCTTGGTGGAAATCTTTGTCTTTGCCTTTTTACCAGGACAAGCTTCAGGACAGGGACAAAAAACTTGAGAGGACGGTCACTGTCGGTTTACAAGTTCAGATCGCAAGGGATGTGACGGAGACCTTGACGATGGTGAAAGAACTTCTTGAGAATTCTGTGCTAAGAAGTAATGGCTCACCAATGAAGGGGGTGTGCGGGGCTCCTGAAAACCCAGAATTCACAGTGGGATTTGATGGGCCTTTGAACAACATCAAGATTGAGCTGCTCAAGGGTGGTGTATCGGTCCTTGTATTGAGTGGTTTGCCTGGATCCGGGAAGACAACATTGGCTAGAAAGATCTGTTGGGATCCCGATGTTAGAGGCAAGTTCAGGGAAAACATCTTATTTGTGACCTTTTCAAAAACACCCAACTTGAAGAGCATTGTGCAGACAATATTTGAGCACTGCGGGCGTCGGGTGCCCGATTTTCAAAGCGATGAAGATGCAACTAATCGATTGGGTGTTTTGCTGAGGCAAATTGGGAACAGTCCAATGTTGATGGTGCTGGATGATGTTTGGCATGGCTCAGAAACCCTTGTTGAGAAGTTTAAAGTCCGGATTTCTGATTATAAAATTTTGGTGACTTCAAGGTTTGCATTTCCAAGATTTGATACTTCATTACACTTGGAACCACTTGGTCGTCATGATGCAATAAGCCTTTTCCGTCGCGTTTCTCTATCAAATGATAGCAGCGTATACACACCTGATGAGAAACTTGTCGACGAGGTAGTGAGAGGTTGCGGAGGTTCACCATTGGCCATTGAAGTGATAGGCGGATTACTGTGTAATCAGCCCTTTGAGGTCTGGCAAAAGGAACTATCGCGAGGCCAGTCGATTTTTAATTCTGATAATGACTTGCTTCATCGCATTCAGACTAGCTTAGAAGTTTTCAAAGATAAGCCCCGCATTAAGGAGTGCTTTATGGACCTAGGGTTATTTCCTGAAGACCAAATGATCCCCGTCGATGCCCTCATTGACATGTGGGCAGAACTGCATAAACTAGATGGGGAAGGCATAGATGCAATGGACATCATCCATAAATTAACAGCCTGCAACTTGGCTAAGGTTGTGGTTAGAAGGAAAGTTGCAAGGGACGATGACAAGTACTACAATAATCACTTCGTCATGCTGCATGATCTTCTCAGAGAACTAACCATTTATCAAAGCAGCCAGGAACCATTTGACGAGAGGAAAAGATTGATTATTGACTTAAGTGAAAATAATCATCCCGAATGGTGGCCAGAACAGAAGCCACAAGGGGTCATGGCCCGCATATTGTCATTATTTCCTGGATGGTGGATAGAACAGAAGCAGCAACAAGTTATTGCCAACACATTGTCTATATCAGCAGATGAGACATCTACTTCAGATTGGTGCAACTTGCAACCTGAAAAAGCGGAGGTTTTGGTTTTAAATCTTCGTAGTAGCAATTACACCATACCAGAGTTCCCAGACAAAATGAGTAAACTCAAGGTTCTGATAATCACAAATTATGGTTTTCATATTTCCAAATTAACCAAATTTGAGCGACTTGGTTCCTTATCTGACCTGAAAAGAATTAGATTGGAGAAGGTGTCAGTTCCTTGCCTGTGCAAATTGAGGAATCTGTATAAATTATCCCTTTATATGTGTAACACAAGGCAGGCTTTTGAAAGCTGTTCCATCAACATTTCAGATGCACTACCAAATCTAGTGGAGTTGAACATTGATTACTGTAAAGATCTTGTGGAATTGCCTGCTGAGATTTGCAAAATTACCCCCTTGAAGAAGCTCAGTATCACTAATTGTCACAAGTTTTCTGCGCTGCCCCCAGAAATTGGAGAACTTAAGAATTTGGAAGTGCTAAGGATTAGTTCCTGCACTAGTTTGGTAGAGATACCACCCTCCATCGAAAAGCTTCATAAGCTAAATCATATTGACATCTCAGACTGCGTAAGCCTTAACAAACTACCAAAGGACTTTGGTGACTTGCACAGTCTAGAAAAGCTCTACATGAGGGGTTGCTCAAGATGTGAATTGCCAGACTCGGTCATGAATCTTGAGCGTTTAGAGCTTGTAATATGCGATGAAGAAACAGCTGCTTCCTGGGAACTTTTCCGCAATGAACGCATGCTTCCGAATCTAAGGATAGAGCTGCTACAAGCAGATATTAACTTGGATTGGCTTCACGGAGTTGGACACAAGCTTTGTTAG 2490 0.4353 MAGMVRDAAVGAGFGELLKRALEMVEKALEFKNTRQKLRTTVQGMTPLIQEMKTFNEGLDRPQEGVERVITELEACEQLLRKYANVPWWKSLSLPFYQDKLQDRDKKLERTVTVGLQVQIARDVTETLTMVKELLENSVLRSNGSPMKGVCGAPENPEFTVGFDGPLNNIKIELLKGGVSVLVLSGLPGSGKTTLARKICWDPDVRGKFRENILFVTFSKTPNLKSIVQTIFEHCGRRVPDFQSDEDATNRLGVLLRQIGNSPMLMVLDDVWHGSETLVEKFKVRISDYKILVTSRFAFPRFDTSLHLEPLGRHDAISLFRRVSLSNDSSVYTPDEKLVDEVVRGCGGSPLAIEVIGGLLCNQPFEVWQKELSRGQSIFNSDNDLLHRIQTSLEVFKDKPRIKECFMDLGLFPEDQMIPVDALIDMWAELHKLDGEGIDAMDIIHKLTACNLAKVVVRRKVARDDDKYYNNHFVMLHDLLRELTIYQSSQEPFDERKRLIIDLSENNHPEWWPEQKPQGVMARILSLFPGWWIEQKQQQVIANTLSISADETSTSDWCNLQPEKAEVLVLNLRSSNYTIPEFPDKMSKLKVLIITNYGFHISKLTKFERLGSLSDLKRIRLEKVSVPCLCKLRNLYKLSLYMCNTRQAFESCSINISDALPNLVELNIDYCKDLVELPAEICKITPLKKLSITNCHKFSALPPEIGELKNLEVLRISSCTSLVEIPPSIEKLHKLNHIDISDCVSLNKLPKDFGDLHSLEKLYMRGCSRCELPDSVMNLERLELVICDEETAASWELFRNERMLPNLRIELLQADINLDWLHGVGHKLC 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1560 829 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 134 IPR008808 -
Glsi05g1560 829 PRINTS Disease resistance protein signature 258 272 - -
Glsi05g1560 829 PRINTS Disease resistance protein signature 346 360 - -
Glsi05g1560 829 PRINTS Disease resistance protein signature 181 196 - -
Glsi05g1560 829 PRINTS Disease resistance protein signature 706 722 - -
Glsi05g1560 829 Gene3D Ribonuclease Inhibitor 531 803 IPR032675 -
Glsi05g1560 829 Gene3D - 311 391 IPR042197 -
Glsi05g1560 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 409 IPR027417 -
Glsi05g1560 829 Gene3D - 149 299 IPR027417 -
Glsi05g1560 829 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 821 IPR039203 GO:0050832
Glsi05g1560 829 Pfam NB-ARC domain 167 370 IPR002182 GO:0043531
Glsi05g1560 829 Gene3D - 392 485 IPR036388 -
Glsi05g1560 829 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Glsi05g1560 829 SUPERFAMILY RNI-like 575 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1560 Glsi-ChrGlsi05 64025864 64029079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1560 186 785 WRKY Transcription Factor Family AT5G45050 22.687 1.17e-08 57.0