Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1559 ATGGCAATGCTTGTGGACGCTGCTGTTGGAGCTGTAGTTGGGGAACTGCTGAGCGCGGTTTTGGATATGAAGGACAGGGCCGTTCAGTTCAGACCTACCCTCGAACGCCTGGCAATCACCCTCAAGGCAATAGAACCAGTGATCCAACAGATAGAAGGATATAACAGGCGATTGGATCGCCCAAAGGAAGAAACAGAAAGGTTAATCGAAGAAATGAGAAGTGGAAAAAAGCTTGTTCTCAAGTGCTCTGAAATCCAGTGGTGGAAATGCTGTTTTAAGCCCCACTACCAGGAGGAACTTGAAGCCTTAGATGACTCACTTCGTAGGTTCTTTGATTTTGATATGCAAGCTCATATAGCGAGGGATCAGAAGGAGGTCCTACTGGAGGTGAGAGATATTCGTGTGGAAGTTCGGAAACTGAATATGGTTCCCAGAAATGATAGGATTGAAATAAGGGGTCTGTGCTCGGCTCCTGAACCCCCAGTATTTACTGTTGGATTGGATATGCCTCTCAAGGAATTGAAGGTGCAGCTGCTTCAGGATGGTGTCTCAGTACAAGTGTTGACCGGCCTAGGAGGTTCGGGGAAGTCTACATTAGCCAAAAAGCTTTGTTGGGATGAGGACATCAAAGGTAAATTCAAGGACAATATCTTCTTCGTCAACTTTTCCAAAACGCCAAACTTGAAAATCATGGTGCAGAAACTGTTTCAACACAATAACTACCAGGTGCCTGATCTTCAAAATGAGGAAGATGCAGTTAATCAGTTGGAACATTTGCTGAAGCTAATTGGGAAAAGTCCAATATTGTTGGTCCTGGACGATGTTTGGGATGGATCAGAATCTCTAGTTGAGAATTTTGTATTCCAGATGTCAGACTACAAGATTTTAGTGACTTCAAGATTTGCAATTCGAAGATTCAGGCCTCCATACTTCTTGAAACCTCTTGGAGATGAGGATGCTACGAAGCTTTTCTGCCAATCAGCAAACCTGAAGGAGAGCAGCTCTGATATTTCTGATGATCTTGTGAGAGAGATAGTAAGAGGCTGCAGTGGTTCTCCCTTGGCACTTAAAGTGATGGGCAGATCACTCTGTCAGCAGCATCCTGTGGTGTGGCAGAGCAGGGCGATGGAATTGTCCAAGGGTCATTCAATTTTTGATTCTAATAATGATCTGCTAACTTGTCTCCAAAAAAGCTTCGATGCCTTAGATACTAAGGCAATTATTAAGGAGTGTTTCATGGACCTAGGTTTATTTCCCGAAGACCAGAGGATCCCTGCAGCTGCCCTTGTTGATATATGGGTGGAACTGCATGGTGAAGATGATATTACTGCAATGGAGAACGTTTACGAACTGGCCACCCGGAACATGGCTGATGTTGTCACAAGGAAAATTACAAGTGACCCAGGTAACTACAATGACCACTTTGTAATGCAGCATGATCTTCTTCAAGAGTTAGCTATCCATCAAAGTAGCCAGGAGCCAGTGGCACAGAGGAAAAGACTGATTATAAACATCGTTGGAAATGATCTTCCTGATTGGTGGACTGTACAGAATGATTACCCAATTGCTGCCCGCATATTGTCAATATCAACTGATGGAAGAAATGGGGAAACTGCTTCTGATCCTTGGAAGGGTTTTCCTAGGTTTGCGTTTAATACTAGTGCTACTTACTCGGTCTCGTTATTTAACTCGGTTCCGCTTCCGCGTCATGACAAGGAAGAAATAGAGACGCTGATCAAGGAAAAGGAAGCAGGGGAAGAGGCTGTTCGCAGGTGCCCGAAATTCCCTTACTTGAAATCCCTTGGTGGAAGAAATTACCAAGACAAGCTTGGGGAAGGGCACAATTCAATTGTGAACTGCTTGTCTTTTAATATACAAAAGCAAACTGAGATGGCAAGAGATGTGGAGATGACTCTGAACCAGGTTAGGGATATTCTGGAAAAACTTAGCAACGAGAATTATGGGCAGGGAATGATGTGCTGGCCTCCTCAAAACCCGGAATTCGTTGTTGGGATGGACGAACCTTTGGCGAGGTTGAAGATGGAGCTGCTCAAGGATGGTGCATCCATTCTTGGATTGACTGGTATGCCAGGATCTGGAAAGACCACATTAGCAAGAAAGCTCTGCTGGGATGACCATGTCAAAGGCAAATTCGGGGAACATATCTTATTTGTCACCTTCTCAAAAACTCCGAACTTAAAGATCATTGTACAAGCACTATTTCAACGCTCTGGATGTTGGGTGCCTGAATTTCATAGCGATGAAGATGCAGTTAAAGGGTTGGGACTTCTGCTGAAGCAAATTGGGGAAAGTCCAATTTTGTTGGTCCTGGATGACGTTTGGCCTGGCTCAGAATCACTTGTTGACAACTTCAAGTTTCAGATGCCAGACTACAAAATTTTGATCACTTCAAGAATTGCATTTCCAAGAGTTGATCCTCAAATCCAGTTGGAACCACTTCGTTACGAAGATGCATTAACCCTTTTCCGTCACTTTGCTCTCCTAAAAGACAACAGTCCATACGTTCCCGATGAATATATTGTTCAAGAGGTTGTGAGAGGTTGTAGGGGTTCACCGTTGGCCCTTAAAGTCATTGGTAGATCACTCTGTCAGCAACCTTTCGAGGTATGGCAAAAGATGGTAGAGGAATGGTCACTAGGTCATTCGATTCTTGATTCTAATAATTATTTGCTTACTTTCCTCCAAAAGAGCTTGGATGTTTTGGAAGAGAAGTCCATCATCAAGGAGTGCTTTATGGACCTAGGGTTATTTCCTGAAGACCAAAGAATTCCTGTTGCTGCGCTCATTGATATGTGGGCAGAACTGTATAAACTAGATGATGACGGCAGAGAAACAATGGCCATTATCAATAAATTAGCCTCCCGAAATTTGGCAAATGTCCTTATTACAAGGAAAGTTGCAAGTGATGCGGACAATTACTACAATAACCACTTCATCATGATGCATGACCTTCTCAGAGAGCTTGCAATTTATCAGAGTAGCCACGAACCATTTAAACAGAGAAAAAGATTGATGATTGACGTTCACGAAAATAATCGCCAATGGTGTCTAGAGAAGAAGCAGCAAGGCATTATTGCCTGCATATTGTCAAAATTCCTTAAATGGTGTGTCGAGCAGAAGCAGCAACGGTTCCTTGTCCGCACTTTGTCTATATCATCTGATGAAACGTTCACTTCAGATTGGCGCAACACGCAACCAGCTGAAACTGAGGTTCTGATTTTGAATGTTCGAACTAAGCAGTATTCCTTGCCGGATTTCACAAAGAAAATGAACAAGCTAAAGGTTCTAATATTTACAAACTATAGTTTCCATCCTTCTGAATTGAAAAATTTTGAGCTGCTTGGCTCTTTATCTAACCTGAAAAGAATTAGACTGGAGAAGGTTTCTGTTCCTTCCCTAGGCAAATTGAAGAATCTGCGGAAACTATCCCTTTATATGTGCAATACGAGTCAGGCCTTTGAAAGTTGTACCATCCCAATCTCAGATGCATTGCCAAATCTAGAGTTTTTGAACATTGACTATTGCAAAGATATGGTGGAATTGCCTACTGGGCTCTGTGACATTAGCCCCCTGAAGAAGCTAAGTGTTTCTAATTGCCACAAGTTTTCTACTCTGCCCCAAGAAATTGGAAAGCTCGAGAATTTGGAATTGCTAAGGCTTAATTCCTGTAGTGATTTAGTAGGGATACCGGATTCAATTGGAAGGCTTTCCAAGCTAAGCTTTCTTGACATATCAGATTGCATAAGCCTTAGAAAATTACCAGAGGACATTGGTAACTTATATAATCTAAAGAAGGTCTATATGACAGGTTGCTCAAGGTGCGAATTGCCGGTCTCAGTCACGAATCTTGAGCATTTAAAGGATGTCACATGCGATGAAGAGACGGCTGCTTCATGGGAAATTTTCAAGCCCATGCTTCCCAATTTAAGGATTGAGGTGCCACAGGTGGATGTGAACTTAAATTGGCTTCTTGGGACTAGCTCCCAAAACATGGTCTAA 4020 0.4284 MAMLVDAAVGAVVGELLSAVLDMKDRAVQFRPTLERLAITLKAIEPVIQQIEGYNRRLDRPKEETERLIEEMRSGKKLVLKCSEIQWWKCCFKPHYQEELEALDDSLRRFFDFDMQAHIARDQKEVLLEVRDIRVEVRKLNMVPRNDRIEIRGLCSAPEPPVFTVGLDMPLKELKVQLLQDGVSVQVLTGLGGSGKSTLAKKLCWDEDIKGKFKDNIFFVNFSKTPNLKIMVQKLFQHNNYQVPDLQNEEDAVNQLEHLLKLIGKSPILLVLDDVWDGSESLVENFVFQMSDYKILVTSRFAIRRFRPPYFLKPLGDEDATKLFCQSANLKESSSDISDDLVREIVRGCSGSPLALKVMGRSLCQQHPVVWQSRAMELSKGHSIFDSNNDLLTCLQKSFDALDTKAIIKECFMDLGLFPEDQRIPAAALVDIWVELHGEDDITAMENVYELATRNMADVVTRKITSDPGNYNDHFVMQHDLLQELAIHQSSQEPVAQRKRLIINIVGNDLPDWWTVQNDYPIAARILSISTDGRNGETASDPWKGFPRFAFNTSATYSVSLFNSVPLPRHDKEEIETLIKEKEAGEEAVRRCPKFPYLKSLGGRNYQDKLGEGHNSIVNCLSFNIQKQTEMARDVEMTLNQVRDILEKLSNENYGQGMMCWPPQNPEFVVGMDEPLARLKMELLKDGASILGLTGMPGSGKTTLARKLCWDDHVKGKFGEHILFVTFSKTPNLKIIVQALFQRSGCWVPEFHSDEDAVKGLGLLLKQIGESPILLVLDDVWPGSESLVDNFKFQMPDYKILITSRIAFPRVDPQIQLEPLRYEDALTLFRHFALLKDNSPYVPDEYIVQEVVRGCRGSPLALKVIGRSLCQQPFEVWQKMVEEWSLGHSILDSNNYLLTFLQKSLDVLEEKSIIKECFMDLGLFPEDQRIPVAALIDMWAELYKLDDDGRETMAIINKLASRNLANVLITRKVASDADNYYNNHFIMMHDLLRELAIYQSSHEPFKQRKRLMIDVHENNRQWCLEKKQQGIIACILSKFLKWCVEQKQQRFLVRTLSISSDETFTSDWRNTQPAETEVLILNVRTKQYSLPDFTKKMNKLKVLIFTNYSFHPSELKNFELLGSLSNLKRIRLEKVSVPSLGKLKNLRKLSLYMCNTSQAFESCTIPISDALPNLEFLNIDYCKDMVELPTGLCDISPLKKLSVSNCHKFSTLPQEIGKLENLELLRLNSCSDLVGIPDSIGRLSKLSFLDISDCISLRKLPEDIGNLYNLKKVYMTGCSRCELPVSVTNLEHLKDVTCDEETAASWEIFKPMLPNLRIEVPQVDVNLNWLLGTSSQNMV 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1559 1339 Coils Coil 632 652 - -
Glsi05g1559 1339 PRINTS Disease resistance protein signature 855 869 - -
Glsi05g1559 1339 PRINTS Disease resistance protein signature 690 705 - -
Glsi05g1559 1339 PRINTS Disease resistance protein signature 1217 1233 - -
Glsi05g1559 1339 PRINTS Disease resistance protein signature 767 781 - -
Glsi05g1559 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 415 IPR027417 -
Glsi05g1559 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 655 921 IPR027417 -
Glsi05g1559 1339 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 568 1330 IPR039203 GO:0050832
Glsi05g1559 1339 Gene3D - 820 897 IPR042197 -
Glsi05g1559 1339 Gene3D - 315 398 IPR042197 -
Glsi05g1559 1339 SMART AAA_5 687 821 IPR003593 GO:0016887
Glsi05g1559 1339 SMART AAA_5 182 307 IPR003593 GO:0016887
Glsi05g1559 1339 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Glsi05g1559 1339 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 137 IPR008808 -
Glsi05g1559 1339 SUPERFAMILY RNI-like 1088 1296 - -
Glsi05g1559 1339 Pfam NB-ARC domain 675 885 IPR002182 GO:0043531
Glsi05g1559 1339 Pfam NB-ARC domain 172 379 IPR002182 GO:0043531
Glsi05g1559 1339 Gene3D Ribonuclease Inhibitor 1040 1312 IPR032675 -
Glsi05g1559 1339 Gene3D - 150 305 IPR027417 -
Glsi05g1559 1339 Gene3D - 657 809 IPR027417 -
Glsi05g1559 1339 Gene3D - 901 998 IPR036388 -
Glsi05g1559 1339 Gene3D - 399 489 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1559 Glsi-ChrGlsi05 64014891 64023164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1559 190 424 WRKY Transcription Factor Family AT5G45050 23.171 8.28e-07 52.0