LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi05g1550	ATGGAATACGGACCCGCGGAGCTTTCCTTCTCAACGACAGGTAAGGCCCCGATTTCCTCTCTAGGGTTTAAAGAGGGGTTTTCTTCAAATTTGATTTCAAATATTGAAGAAGGATCTTCGGCAAACTCCGATAAAACATTTCTGATAGCAAACAACACAATGTCATTTTCGTTGTTTTCAACTCCACAGCAACAGCCGCTGTTTCAGCCCCAACAGCAGCAGCAGCAGCAGCAGCAGGGCAGTATGTTCTTTCCGCAGCAGCAGCAGCAGCAACAACAACCATTGCAACCCCAACAACAAATGTTTCTGTTCACTAGCGATAAAACTCCAGCTAATTATAGTACCAAGTGGGCGGATCTTCATCCTGATTCTCAGAAGATTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAGAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCCATTTCAAATTATGGGTCCGAGCTTGATGCAAGCCACATTGTTCAGGAACTGGGTGGAATCAGCACTGCCATGGAACGACAGAAAACTTTGTTGCAAGAACGGATGTGTGTTGTTAAGGATACGTTGCGCAACACAGAGGTTGCTATTCGTACTTTTATGATGTTACGTCCAAGGTTTCTTCATCCTAGTTTAGGGGTTGCTCCAAATGCCACAGCCCCTTCGCAGACTACTGGAACAACTTTAATACCTAGTTCAAGCAGCCAACCAACAGTTACAGCAATAGTGCCTGTTTTTGATTTCTACAATGGGCTTCCAAAGAAACCATCACCCTTTTTTCAGCTAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAATGCCGTCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTTTTAGACTCTGAGAGAAACAATTCTAATAACAGATCCTCATTATTGGAATCTCTTCCTAAAGTCATGGAAAATGTGCATGACTTCTTTGTTCATGTGGCTGCAAAGGTGGAAAGCATTCATCAATACATTGAATCTATGAAATCAGCTTACCTAGCTGATCATCGCCGTTGGGGGGAGGTAAATGATCCATTTTTAGAGGCTGATCGGCGAGAAACAGCAAGACAAGAAGCTGCCTCGAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATGCACAACCATCAACACAAGTTGCTGGATTGTTTTCCAGTTCAGGAACTCAAGGGACATTGGCTGCTCTGCAGACATCAGCAGTAACTTCGTCAACATCATCAGGAAGTGGGTTTTCGCACTTTAACACTTCTTCTTCAGCTCCATCTTCCTCAATGTCGTCTCTTTTTACAACTCCAACGACTTCTGCTCCAGTATCCTCTTTGTTTGGATTGTCCAGTGCTACACCCCAAGCCTCACTTTTTAGTTCTTCATCAGCTTCCTTATTTGGTCCTTCTTCAACGCCCTCTCTGTTTAGTGGTACTACTACACCATTTGGTACAAGTACTGGAGGTTCTCTATTTTCAACTCCATTTGCTTCAGGTGCTGCAACAGGATCAGGGGCGAGCTTTGGGCCTGGATCGAAATCATCACGACCAAAATCCAGAACTGCTCGACGCTAA	1593	0.4407	MEYGPAELSFSTTGKAPISSLGFKEGFSSNLISNIEEGSSANSDKTFLIANNTMSFSLFSTPQQQPLFQPQQQQQQQQQGSMFFPQQQQQQQQPLQPQQQMFLFTSDKTPANYSTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSISNYGSELDASHIVQELGGISTAMERQKTLLQERMCVVKDTLRNTEVAIRTFMMLRPRFLHPSLGVAPNATAPSQTTGTTLIPSSSSQPTVTAIVPVFDFYNGLPKKPSPFFQLTVLRFEKYLGECRQWIEELEQLLLLDSERNNSNNRSSLLESLPKVMENVHDFFVHVAAKVESIHQYIESMKSAYLADHRRWGEVNDPFLEADRRETARQEAASKRVHPTLHLPANAQPSTQVAGLFSSSGTQGTLAALQTSAVTSSTSSGSGFSHFNTSSSAPSSSMSSLFTTPTTSAPVSSLFGLSSATPQASLFSSSSASLFGPSSTPSLFSGTTTPFGTSTGGSLFSTPFASGAATGSGASFGPGSKSSRPKSRTARR	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi05g1550	530	MobiDBLite	consensus disorder prediction	415	441	-	-
	Glsi05g1550	530	MobiDBLite	consensus disorder prediction	63	97	-	-
	Glsi05g1550	530	Gene3D	-	262	352	-	-
	Glsi05g1550	530	PANTHER	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	15	518	IPR024882	GO:0005643\|GO:0006913\|GO:0008139\|GO:0017056
	Glsi05g1550	530	MobiDBLite	consensus disorder prediction	506	522	-	-
	Glsi05g1550	530	MobiDBLite	consensus disorder prediction	506	530	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi05g1550	Glsi-ChrGlsi05	63937564	63943968	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi05g1550	63	530	NAC Transcription Factor Family	AT4G37130	60.196	0.0	526