Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1538 ATGATAGTTTACGTTCTTAGACGGCAGCCAAGTGTGAACGACCCGGCACTTCTAACAATTCCTCAATTTGCTAAGCACGAGTCTTTGCCGGACGATGGATCATTTACGACGCAACCCTTAATAGAGAACAACTTCAATTTGCATCCAACAATGTTTCGCTATCAGAAAATTTTTGCTATTTTGCTCACAATCTTCATGGTATACTCAACAAGAGCCGAAAACAACACAACCTGTCAGAGCAGTTGCGGTGAATATTTCCTCCGGTACCCTTTCGGGTTCTCTGAAGGTTGCCAAATCCGACTAACCTGCAGCACCAGCAACCAAATCCAAATTGCCGAATTACTGGTCCAGAACGTAACCTCCAGCAGTATATTCGTCAATCTTCCCGCGAAATGCAACCGTGACATGCAATCCATCATGCCCCTTTTCGGCACAAACTTTGCTCCCACAAAGAACAATAGCCTTCTCGTGCAAAATTGTACATCGGCGCTTGGCGGCTGCGTTATTCCCACCTCCAGTTTTATGAGCAATCACATTGAGTTGGAGGGCTGCGATAAAAGAAGTGATAATATCAGTTGCTTTACGCAAGGGCAAGGCCAGGAAGCTTTTGATGTTCTGACATGGGGGGATGTGAATAAAACTGGGTGCAAGTTTTTGTTCTCAGCAATTGCTATTGACCAGAGGAAAGAACTATCGGTTTCGCTCCAGTTTCAGATGCTTGAGTTGGGGTGGTGGCTTGAAGGGTCATGCCATCAATGCTCTCCCATTGCAAGGTGTACAAACGTCAGTATCGACCACGGGAAGTCTGGGTTCCGGTGCCACTGCCCTGAAGGTTATCGCGGAGATGGATTCCAGAACGGCACCGGTTGCCGGAGATCAGTTGCTAAGTGCAGCGCTTCAACATTAACGTCTGGCGGATGCGGAGGAGCAACTAAAATCGGTGTTCTTGTTGGAGGGATCACTGCTGGAGTTTTCTTGATGGTTGTTCTGTTTCTTCTATGTTGTTATGTGCGACGCCGCTCCTATTGTTTGAGAAAGCAAATGACTGTGAAGCGCCTATTACGTGATGCTGCTGGCGACTCCAGCGTTCCTTTTTATCCTTACAAAGAAATAGAAAAAGCCACTAATTTTTTCTCTGAGAAACAAAGGCTGGGAACTGGGGCTTTTGGTACAGTTTATGCAGGAAAACTCCACAATGAAGAGTGGGTTGCAATAAAAAAAATAAAACACAGAGACACCAACGGCGTTGACCAAGTCATGAATGAGATCAAGCTCCTCTCTTCTGTGAGTCACCCGAATTTAGTCCGCCTCTTGGGTTGCTGCATAGAGGAGGGTGAACAGATCCTTGTTTATGAGTTTATGCCCAATGGAACACTGTCTCAGCATTTACAAAGAGAGAGGGGTAAAGGACTTCCATGGACAGTTCGGCTCACGATTGCTGCTGAAACTGCTAATGCCATAGCATATCTCCACTCTGCCAATGATCCCCCTATTTACCACAGAGACATAAAATCCAGTAATATACTGTTGGATTACAACTTCAACTCAAAAGTAGCAGACTTTGGGCTTTCAAGGCTTGGCATGACTGAAATATCTCATATCTCAACCGCCCCACAAGGGACTCCAGGCTATGTCGATCCTCAATACCACCAGAACTATCATCTTTCTGATAAAAGTGATGTTTACAGTTTTGGAGTGGTCTTGGTAGAGATAATAACTGCCCTGAAAGTAGTTGATTTTGCTCGACCTCAGAGTGAGGTTAATTTGGCTGCACTTGCTGTTGAAAGGATTCGGAGGGGTTGTGTGGACGAAATCATAGATCCTTTCCTCGAGCCACATAGGGATGCTTGGACACTCTATTCTGTTCACAAGGTGGCTGAGCTTGCATTTAGATGCCTCGCATTTCATAGTGACATGAGGCCTACTATGATGGAAGTAGCAGAGGAGCTGGACCACATTAGACGCAGTGGATGGACAACAATGGAGGAAACTATATGCACGGCATCATCGGTTGGGTCCTCATGCTCATCACCACGTGACGGAAGTGAGAAGTCACTTGGTGTTATTAATATTAAGAAAGCAGGACTAGAGAAAGAGAGGTTGATTGTTCCACAGGCGGATAGTTTTCTTCATTCTGTGGAGGAAGTGAAGGACAGCTCCCCTGTATCAATGCATGACCCTTGGCTGAGTGGACAGAGCTCACCTTCAACAAACAGCTTGTTGGGAAATGTAGCTCAATGA 2241 0.4578 MIVYVLRRQPSVNDPALLTIPQFAKHESLPDDGSFTTQPLIENNFNLHPTMFRYQKIFAILLTIFMVYSTRAENNTTCQSSCGEYFLRYPFGFSEGCQIRLTCSTSNQIQIAELLVQNVTSSSIFVNLPAKCNRDMQSIMPLFGTNFAPTKNNSLLVQNCTSALGGCVIPTSSFMSNHIELEGCDKRSDNISCFTQGQGQEAFDVLTWGDVNKTGCKFLFSAIAIDQRKELSVSLQFQMLELGWWLEGSCHQCSPIARCTNVSIDHGKSGFRCHCPEGYRGDGFQNGTGCRRSVAKCSASTLTSGGCGGATKIGVLVGGITAGVFLMVVLFLLCCYVRRRSYCLRKQMTVKRLLRDAAGDSSVPFYPYKEIEKATNFFSEKQRLGTGAFGTVYAGKLHNEEWVAIKKIKHRDTNGVDQVMNEIKLLSSVSHPNLVRLLGCCIEEGEQILVYEFMPNGTLSQHLQRERGKGLPWTVRLTIAAETANAIAYLHSANDPPIYHRDIKSSNILLDYNFNSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLVEIITALKVVDFARPQSEVNLAALAVERIRRGCVDEIIDPFLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMMEVAEELDHIRRSGWTTMEETICTASSVGSSCSSPRDGSEKSLGVINIKKAGLEKERLIVPQADSFLHSVEEVKDSSPVSMHDPWLSGQSSPSTNSLLGNVAQ 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1538 746 ProSitePatterns Protein kinases ATP-binding region signature. 384 407 IPR017441 GO:0005524
Glsi05g1538 746 CDD EGF 251 283 - -
Glsi05g1538 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Glsi05g1538 746 SUPERFAMILY Protein kinase-like (PK-like) 360 650 IPR011009 -
Glsi05g1538 746 MobiDBLite consensus disorder prediction 720 746 - -
Glsi05g1538 746 MobiDBLite consensus disorder prediction 725 746 - -
Glsi05g1538 746 ProSiteProfiles Protein kinase domain profile. 378 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1538 746 Gene3D Phosphorylase Kinase; domain 1 341 453 - -
Glsi05g1538 746 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 60 729 IPR044652 GO:0004672
Glsi05g1538 746 FunFam Wall-associated receptor kinase-like 20 454 663 - -
Glsi05g1538 746 FunFam Wall-associated receptor kinase-like 14 345 453 - -
Glsi05g1538 746 Gene3D Transferase(Phosphotransferase) domain 1 454 670 - -
Glsi05g1538 746 SMART serkin_6 378 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1538 746 Gene3D Laminin 249 286 - -
Glsi05g1538 746 Pfam Protein kinase domain 378 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1538 Glsi-ChrGlsi05 63863085 63867330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1538 57 746 Receptor kinase-like Gene Family AT2G23450 55.954 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi05g1538 Pkinase 8.9e-46 CL0016