Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1522 ATGATGAAGAGGGGTCCTCGCGTACGTGTGAGGGGAGAGGGTGGGATTCACGTGATATCGCCCGATCGAAAGGCGACACGCGACAGTTGGGAAAGGAGCGGAAGCTACACCGAAAGGGAAAATGAACATGGCCATCTTGACAGTGCCAAACCTTTAAGCAGTTACGGGTGCTTTTCAGACCATATACTTGTATCTCCCTATGCAAAACCTAACTTGTCTTTAAGGGAAAAAAAAGGAGATGATGATGAACAAGATTTTAATATGGGAATAGCAACACCGCCACTTCCATCAATTCTCTCTCACTCAAAGACTCACCATTCCTTTTTCATCTTGGACAAGTCTGATTATTCCAATTCTATGTCCCAAGATTATCACCAAGGAATCTTCAGCTTCTCGAATGGGTTCGAGAGATCCAGTGTAACTCACCAAGAACATCAGCAATCTCATCACCACCATCCACAGCAGCAGCAGCAACACTTGGCTCAGCAGATCCGGAGGGACAAAGTGACAGTGCAAGGCTTCGAGCCGCCACCACCATTAGTGGGTATTGAGGAAGAGGAATCTGGAGGCCTTCCAGTGTATGAAACTGCAGGAATGTTATCGGAGATGTTTAATTTCCCGGCCACTGAATTGTTGGAACAACAACCCATGACGGCGACGTATCGGTCCAGTAGGCCACAACCAGTGGCCACTGCGATGGGCAGCGAGTGGTACGGAAACCGACAAGGGATGGTAAGTGGTTTGGGACCGTTGGGAGATTCAAAGAATCAGAATAGTGTGAATAGCCGTGACAGTGTAGTTCAGCATCACCACCATCATCATCGTCAGATATCAAGCATTAATGCAGATTCAGCGGCTGCCATGCAGCTTTTTCTCATGAACCCACAAACAAGATCGCCTTCTCCTCCTCATAATCATAATCCTGCGACACTGCACATGTTGCAAGGGTTCGCTGGGGGAGGAGCAGGAGGGGCTTTTGGTCAATTCACATGGGTTCCTGATAGTGCTCAAGGAGGCACCAGTACTGGCCCCCAACTCAACACCAACCCAGCTGAAATTGGAGGGGTTGTGGAAGGCCAAGGTCTTTCCTTATCATTGTCGTCTTCCTTGCAACACTTTGAAGCAGCGAAAGCCGAGGAATTGCGGATGGGGGATAGCGGGTTTCTGTACTACAATCAAGGAGCTGGAGGATCCTCATCTGCTCACTATCCGTACAAGAATTTGGGTAGTCAAAACCAGACATTGCATTTACAAGGGGGAATGGGGCAGAACCACCAGGTACATGTTGGTTTTGGGTCATCCTTAGGTGTTGCGAATGTGCTGAGAAATTCAAAGTATGTGAAGGCAGCTCAAGAATTGCTTGAAGAATTCTGCAGCGTTGGAAGGGGTCAGTTCAAGAAGAACAAATTTAGTAGGCAGAACTCAAACCCTAATTCCAATCAGGGTGTTGGTGGCGGTGGTTCTTCATCTTCAACCAAAGATCCTCCTCCTTTGTCAGCGGCTGATAGGATAGAGCATCAGAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGATCGAAGATACAATCACTACTGCGAACAAATGCAAATGGTAGTGAACTCATTTGACTTGGTGATGGGTTATGGGGCGGCAGTTCCATATACAGCGCTGGCACAGAAAGCAATGTCTAGGCATTTCCGGTGTCTAAAGGATGCAATATCAGCACAGCTGAAGCACAGTTGTGAGCTGCTGGGAGAGAAAGATGGGGTGGGGTCCTCAGGTTTGACCAAGGGAGAGACCCCGAGGCTTAAAATGCTAGAGCAAAGCCTAAGACAGCAGAGAGCCTTCCACCAGATGGGGATGATGGAACAGGAAGCCTGGAGACCCCAGAGAGGCTTGCCCGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAACATTTCCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGGCTATCGAGAAATCAGGTATCAAACTGGTTCATTAACGCGAGGGTTCGGTTGTGGAAACCCATGGTAGAAGACATGTACCAACAAGAACTTAAAGAAGCAGAGGGTGAAGAAGAGAGAGAAAGGAATCAAAGCAACAGCAACAGTGGCCACCTGCTAGCACAAACTCCGACGGCCACCACCACATCAACAGCAACAGCGCCATCTCCACCACCACCACCAACACCAACAGGCAAAAGATCCGATGTCAATGCTACCGAAAGCGACCCTTCACTCGTTGCAATCAATAGACAAGGCTTCTCAGAAAACCAAGTAAAGCAGTCTAGCTCTACCGCTACCATGATGCCTCCCAACACCACCGCCTCTGAGGTGGCGCCACCCTTGTCTCAGTGTTTCGACTCAGACCTGTCCCCACACAGAACAATGGCTACTGATGACACGTGTCGCCGTGACAGCTTGGTTACACCAGATTACAGGACCGCCTCTGCTACTGCTGACATTGGATCTACTCTCATTAGGTTTGGGACCACCGCCGGTGATGTGTCACTCACCCTAGGGCTACGCCACGCCGGAAACATGCCCGAGAACACTCCTTTCTCTGTTAGAGACTTTGGAGGCATTTAA 2610 0.4927 MMKRGPRVRVRGEGGIHVISPDRKATRDSWERSGSYTERENEHGHLDSAKPLSSYGCFSDHILVSPYAKPNLSLREKKGDDDEQDFNMGIATPPLPSILSHSKTHHSFFILDKSDYSNSMSQDYHQGIFSFSNGFERSSVTHQEHQQSHHHHPQQQQQHLAQQIRRDKVTVQGFEPPPPLVGIEEEESGGLPVYETAGMLSEMFNFPATELLEQQPMTATYRSSRPQPVATAMGSEWYGNRQGMVSGLGPLGDSKNQNSVNSRDSVVQHHHHHHRQISSINADSAAAMQLFLMNPQTRSPSPPHNHNPATLHMLQGFAGGGAGGAFGQFTWVPDSAQGGTSTGPQLNTNPAEIGGVVEGQGLSLSLSSSLQHFEAAKAEELRMGDSGFLYYNQGAGGSSSAHYPYKNLGSQNQTLHLQGGMGQNHQVHVGFGSSLGVANVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFSRQNSNPNSNQGVGGGGSSSSTKDPPPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGYGAAVPYTALAQKAMSRHFRCLKDAISAQLKHSCELLGEKDGVGSSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGEEERERNQSNSNSGHLLAQTPTATTTSTATAPSPPPPPTPTGKRSDVNATESDPSLVAINRQGFSENQVKQSSSTATMMPPNTTASEVAPPLSQCFDSDLSPHRTMATDDTCRRDSLVTPDYRTASATADIGSTLIRFGTTAGDVSLTLGLRHAGNMPENTPFSVRDFGGI 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1522 869 MobiDBLite consensus disorder prediction 693 707 - -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 1 47 - -
Glsi05g1522 869 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 164 707 - -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 741 789 - -
Glsi05g1522 869 SUPERFAMILY Homeodomain-like 625 690 IPR009057 -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 138 165 - -
Glsi05g1522 869 Pfam Homeobox KN domain 640 679 IPR008422 GO:0003677|GO:0006355
Glsi05g1522 869 ProSiteProfiles 'Homeobox' domain profile. 620 683 IPR001356 GO:0003677
Glsi05g1522 869 SMART HOX_1 623 687 IPR001356 GO:0003677
Glsi05g1522 869 FunFam BEL1-like homeodomain protein 4 626 688 - -
Glsi05g1522 869 Pfam Associated with HOX 440 570 IPR006563 -
Glsi05g1522 869 Coils Coil 686 706 - -
Glsi05g1522 869 Gene3D - 626 688 - -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 468 496 - -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 1 48 - -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 708 727 - -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 250 273 - -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 693 791 - -
Glsi05g1522 869 CDD homeodomain 623 684 IPR001356 GO:0003677
Glsi05g1522 869 SMART prehox3 435 571 IPR006563 -
Glsi05g1522 869 MobiDBLite consensus disorder prediction 468 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1522 Glsi-ChrGlsi05 63768904 63777758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1522 110 670 Homeobox Transcription Factor Family AT4G36870 49.918 4.67e-146 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Glsi05g1522 POX 3.2e-52 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1522 05 63768904 63777758 Glsi05g1522 05 63768904 63777758 ECH