Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1519 ATGAATAAAATGCTCTTCTTAGCTATTCCTCTAGAAGCAAAGCCAACGGCTGGTATCAGCTCCTGTGTTGTGCCTCACATACAAAACTCAAATGGTTGTAACAACATGGACCAGCAGGAATTAACTACAGAACAAGTTCTGAGGAGGGATATCCCATGGGAAACGTACATGAGCACTAAGCTGATCTCAGGCACAAGTCTTCAGCTCATAAGGCGTTATGATCATAGATCACAAAGTCACAGATCACAGCTGCTGGATGATGATGGTCCAGCTTATGTACGTGTATTTGTTCATGTTTTGCGTAATATATTCAAAGAAGAGACTGTAGAATATGTTCTGGCATTAATAGATGAAATGCTTACAGCAAACCCAAAAAGAGCTAGACTGTTTCATGATGAGTCCCTTGCAGATGAAGATACCTATGAACCTTTCTTAAGAAATTGGTTCGTACAAGTGAAAAGTTGTAAGATCCTTGCTTTGATAGTGAGTGCCAGGCAAAAAAATCAGCACCCCAATGTTGCAAATGGAGAAGCATCAAATTCAGAGAAGCCATTTACTACTATAGATGATGTTTTAAAAGAATTGGTAAAATGGCTTTGTGAACAGCTGAGGAACCCTTCTCATCCTAGTCGTGGTATTCCAACTGCTATCAATTGCTTAGCAGCTCTACTTAAGGAACCAGTGGTTAGGTCTTCATTTGTTCAAACAGGTGGGTTCAAGTTGCTTGTACCTTTGATTTCTCCGGCATCCACCCAACAGTCTATTCAGCTGCTATATGAAACATGTCTCTGCATATGGCTCTTATCCTATTATGAGCCGGCAATTGAATACCTGGCTACTTCGAGAACCCTTCCACGACTTATTGATGTTGTTAAGAGTTCTACTAAAGAGAAGGTTGTTAGAGTAGTTGTCTTAACCCTTAAAAACGTGCTGTCAAAAGGGACATTGGGTGCTCAAATGGTTGACCTTCAGCTGCCCCAAGTCGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCGCTGAGTTATCTGGAAGAAGGGCTTAAGGATAACATTAAGAAATTAAGTTCGTTTGATAAGTATAAGCAAGAAGTTCTCCTTGGCAATCTGGATTGGTCTCCCATGCATAAAGATCCCTTATTTTGGCGAGAAAACATTACCAACTTCGAAGAAAATGACTTCCAGATTCTAAGGGTCCTAATAACAATTTTGGACTCGTCCAGTGATCCAAGGACTCTGGCTGTTGCTTGCTTTGACCTTTCACAGTTCGTCCAACACTATCCTGCTGGGAGGATCATAGTGAAAGACCTTAAGGCCAAGGAACGAGTGATGAAATTAATGAATCATGAGAACGCTGAGGTTACTAAAAATGCACTGCTCTGCATCCAACGGCTCTTCTTAGGTGCAAAGTATGCAAGTTTTTTGCAGGCCTAG 1449 0.4141 MNKMLFLAIPLEAKPTAGISSCVVPHIQNSNGCNNMDQQELTTEQVLRRDIPWETYMSTKLISGTSLQLIRRYDHRSQSHRSQLLDDDGPAYVRVFVHVLRNIFKEETVEYVLALIDEMLTANPKRARLFHDESLADEDTYEPFLRNWFVQVKSCKILALIVSARQKNQHPNVANGEASNSEKPFTTIDDVLKELVKWLCEQLRNPSHPSRGIPTAINCLAALLKEPVVRSSFVQTGGFKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRTLPRLIDVVKSSTKEKVVRVVVLTLKNVLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALSYLEEGLKDNIKKLSSFDKYKQEVLLGNLDWSPMHKDPLFWRENITNFEENDFQILRVLITILDSSSDPRTLAVACFDLSQFVQHYPAGRIIVKDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1519 482 PIRSF V-ATP_synth_H 29 481 IPR004908 GO:0000221|GO:0046961|GO:1902600
Glsi05g1519 482 SUPERFAMILY ARM repeat 43 472 IPR016024 -
Glsi05g1519 482 SMART arm_5 271 312 IPR000225 GO:0005515
Glsi05g1519 482 SMART arm_5 225 270 IPR000225 GO:0005515
Glsi05g1519 482 SMART arm_5 432 472 IPR000225 GO:0005515
Glsi05g1519 482 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 35 481 IPR004908 GO:0000221|GO:0046961|GO:1902600
Glsi05g1519 482 Gene3D - 374 474 IPR038497 -
Glsi05g1519 482 FunFam V-type proton ATPase subunit H 373 474 - -
Glsi05g1519 482 Gene3D - 36 361 IPR011989 -
Glsi05g1519 482 Pfam V-ATPase subunit H 42 353 IPR004908 GO:0000221|GO:0046961|GO:1902600
Glsi05g1519 482 Pfam V-ATPase subunit H 359 471 IPR011987 GO:0000221|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1519 Glsi-ChrGlsi05 63740032 63751135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1519 36 482 Primary Pumps ATPases(2) AT3G42050 75.885 0.0 709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1519 05 63740032 63751135 Glsi05g1519 05 63740032 63751135 ECH