Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1500 ATGACCGGCGGAGGATCATCGGGGAGGTTGCCCACGTGGAAGGAGAGGGAGAACAATAAGAGGAGGGAACGAAGAAGAAGAGCGATTGCTGCCAAGATCTATACAGGCCTTAGAGCTCAGGGAAACTATAAGCTTCCCAAGCACTGTGACAACAACGAGGTCTTGAAGGCTCTCTGTGCCGAAGCTGGTTGGATTGTAGAAGAAGATGGCACTACCTATAAAAAGGGATGCAGGCCGCCCCCAGCTGAGATTGGAGGCACTCCAACAAACCTCAGTGCTGGTTCGTCCATTCAACCGAGCCCACAATCGTCATCTTTCCCAAGTCCTGTGCCTTCCTACCATGCCAGCCCGTCTTCGTCTTCCTTTCCTAGTCCCACTCGCATTGACGGAAACCCCTCTTCACTTCTCCTCCCATTCATTCGCAATCTAGCGTCTATCCCTGCAAATCTTCCTCCTCTCAGGATATCTAATAGCGCCCCCGTAACCCCGCCTCTTTCTTCACCAACCTCTAGAGGTTCGAAGCGAAAATCAGATTTGGAGTCCCTCTCCAAGGGCTCTCTTAACTCCTTCCGCCACCCGCTTTTTGCCGCTTCTGCCCCATCAAGTCCTACGCGCCGTCAGCATGTTGTAACTTCGACTATTCCAGAATGTGATGAGTCCGACACTTCTACAGTGAACTCTGGTCGATGGGTCAGTTTTCAGGCAGGAGCAGCCTCAGTTGCTCCTCCTTCGCCTACCTTTAATCTTATGAAACCTGTGGTCCAGCAGATTTCTCCTCAGAGTTCCTTAGATATGAGTGGAGGCATACATTGGAGTCCAGCCGCAGAGAGAGGGCGAGGATCAGACTTTGAGTTTGAGAATGGCAAAGTGAAACCGTGGGAGGGCGAGATAATACACGAGGTAGGACTGGATGATTTGGAGCTTACTCTAGGGTGTGGAAGGGCTCGTTGTTAG 954 0.5168 MTGGGSSGRLPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYKKGCRPPPAEIGGTPTNLSAGSSIQPSPQSSSFPSPVPSYHASPSSSSFPSPTRIDGNPSSLLLPFIRNLASIPANLPPLRISNSAPVTPPLSSPTSRGSKRKSDLESLSKGSLNSFRHPLFAASAPSSPTRRQHVVTSTIPECDESDTSTVNSGRWVSFQAGAASVAPPSPTFNLMKPVVQQISPQSSLDMSGGIHWSPAAERGRGSDFEFENGKVKPWEGEIIHEVGLDDLELTLGCGRARC 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1500 317 MobiDBLite consensus disorder prediction 88 127 - -
Glsi05g1500 317 MobiDBLite consensus disorder prediction 152 172 - -
Glsi05g1500 317 MobiDBLite consensus disorder prediction 75 127 - -
Glsi05g1500 317 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 130 IPR008540 -
Glsi05g1500 317 MobiDBLite consensus disorder prediction 152 185 - -
Glsi05g1500 317 MobiDBLite consensus disorder prediction 1 25 - -
Glsi05g1500 317 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 316 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1500 Glsi-ChrGlsi05 63641316 63642884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1500 9 316 BZR Transcription Factor Family AT1G75080 59.877 3.71e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Glsi05g1500 BES1_N 2.1e-62 No_clan