Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1486 ATGAGAGTTCCCGTTCCATCGTCCCCACACACCCACCATTCCCCCAACCCTAAACCCACTATCTCTAACAACACCGCCACTCCCCGAACCATAATTCCCAATATCAATCCAACCTCCTGCTACGAACCCACTTCTGTTCTCGACCTCTGCCGGAGTCCCAGCCCCCCTGAAAAACCCACTCATCACTCCTCTCTTCCCGACTCCCTCTCCAAGCCAGAAGACTCTCTGGAGTTGGACGAGCATGTGTATAATCTCGATTGGGATTCCATCATGAAGGACTTGGGTTTCCATGACGACTCGGGTGCGTCCCTTTTGAAGAGTGTTTCCCAGCCCAACCCATGTGAACCTCAGGTCCAACACCTCCCGGAGTTCCCATCTTCTCAAGAGCCCCCTTTCGATCACGCTGCTGATTTCACTCTCTCCGATATTTACGCAAATCAAAACACGGGTTACAATTGTAACTCTTTCGATCCCTTGCTTCATGACTTCAATCATAACAGCAACGGGTTCGATTTCATTGAAGAGCTTATTCGAGCTGCTGATTGCTTTGACACGAACCAGCTACAACTCGCCCACGTGATATTGGAGCGGCTCAATCAACGCCTACGATCACCCGTCGGAAAACCCCTCCAGAGAGCTGCCTTCTATTTCAAAGACGCTCTCCAATCTCTACTCTCTGGTTCGAACCGGACTCCACGCCTTTCTTCCTTGGCGGATATTGTTCACAGCATCGGAACCTTCAAGGCCTTCTCGGGAATTTCTCCAATTCCCATGTTCTCCATCTTCACCACCAACCAAGCACTCCTCGAAGCCCTTCATGGGTCGTCCTTTATGCACGTCATCGACTTCGATATCGGTCTCGGTATTCAGTACGCTTCTCTGATGAAAGAGATTGCCGAGAAGCCCGAGTCATGTAAAATCAACTCGCCGATCCTTCGAATCACTGCCGTCGTGCCCGAAGAATACGCCGTGGAAAGCAGATTGATCCGAGAAAACCTGAACCAGTTTGCTCATGAACTCAGAATCCGAGTCCAGGTCGAGTTCGTGCTGTTGCGGACCTTCGAGGCGTTGTCATTGAAGGCCATCAAGTTCATGGACGGAGAGAAGAGCGCCGTTCTGCTATCCCCGACCATCTTCCGCCGTCTCGGTTCGACCAAAAAAATCGCCGCATTTCTAGCGGATGTTCGGAGGGTTTCGCCCAGTGTGGTCGTTTTCGTAGACGGGGAAGGGTGGACAGACGCTGCGGCAGCGACGTCGTTCCGTCGGGGATTCGTGAACAGCCTCGAATTCTACTCGATGATGATGGAGTCGTTGGATGCATCAATGATGGGAGGAGGTGGGGATTGGGTAAAAAAAATTGAGATGGTTCTGTTGCGTCCGAAGATTTTGGCGGCGGTGGAAGGCGGTGGACGGCGGGTTTCTGGGTGGAGGGAGTTGTTTTACGGGGCGGGAATGAGGGCGGTGCAGTTAAGCCAGTTCGCGGATATCCAAGCAGACTGTTTGTTGGCTAAAGTACAAATTAGGGGATTCCAGGTGGCAAAACGGCAGGCAGAGTTGGTGCTCCTCTGGAATGAGCGGGCCATGGTTGCCACTTCAGCTTGGCGATGTTAG 1611 0.5233 MRVPVPSSPHTHHSPNPKPTISNNTATPRTIIPNINPTSCYEPTSVLDLCRSPSPPEKPTHHSSLPDSLSKPEDSLELDEHVYNLDWDSIMKDLGFHDDSGASLLKSVSQPNPCEPQVQHLPEFPSSQEPPFDHAADFTLSDIYANQNTGYNCNSFDPLLHDFNHNSNGFDFIEELIRAADCFDTNQLQLAHVILERLNQRLRSPVGKPLQRAAFYFKDALQSLLSGSNRTPRLSSLADIVHSIGTFKAFSGISPIPMFSIFTTNQALLEALHGSSFMHVIDFDIGLGIQYASLMKEIAEKPESCKINSPILRITAVVPEEYAVESRLIRENLNQFAHELRIRVQVEFVLLRTFEALSLKAIKFMDGEKSAVLLSPTIFRRLGSTKKIAAFLADVRRVSPSVVVFVDGEGWTDAAAATSFRRGFVNSLEFYSMMMESLDASMMGGGGDWVKKIEMVLLRPKILAAVEGGGRRVSGWRELFYGAGMRAVQLSQFADIQADCLLAKVQIRGFQVAKRQAELVLLWNERAMVATSAWRC 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1486 536 Pfam GRAS domain family 173 535 IPR005202 -
Glsi05g1486 536 MobiDBLite consensus disorder prediction 1 74 - -
Glsi05g1486 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 152 529 IPR005202 -
Glsi05g1486 536 ProSiteProfiles GRAS family profile. 163 535 IPR005202 -
Glsi05g1486 536 MobiDBLite consensus disorder prediction 14 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1486 Glsi-ChrGlsi05 63498892 63500502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1486 76 535 GRAS Transcription Factor Family AT4G36710 56.250 1.76e-169 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi05g1486 GRAS 1.1e-86 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1486 05 63498892 63500502 Glsi05g1486 05 63498892 63500502 ECH