Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1478 ATGGCGAAACGTTTCAAGTTTCGTATATCCCGAGTCATCCCATCTTTCCATTCCTGCCGTTCCAAAGACCCCTCCACACTTCCCTCAAACCCAGTCCCTTCCTTCCTCCGACTCACACAGCCAAAACCCAAACTCATTGACTCCCACTTTTCAACTATCACGCCCTCCCCGTCCCCACCACCACCCTTCAAAGCCCATCACTCCTCCCTCAGACGCCACGTGTCATCCGCGTTTGTCTCCGTTGGCTGTGGTTTCAGATCAAGAGCCACCCTCTCCGACGACGACCGAAACGAAACCCATCACTTCCACTGGGAACAGGAAGATAAATGGCACGTCGTCGCCAAGGTTTACGCCGCCGACAATACTCCTCGCCGCAAAATCTACAACTCATCAGTCTCCGGAGGCTCCGATGACGATGACCTCTTGCCTCTTCCACCGCCGCTGCCACGTCTCCCTTGCGACAGGAAGAAGAAACGACGGGTTAAGAAGAAGAGAACGACGCCAAAATTTCGTATCAGCACCTCCTCGGCTGACAGTTATGGATTGTTTAGCAGCGATGGCTGCGACGACGAGAGAGATATCGACGAAGAAGAAACCGAAACCCTAGTTTCGTCTTCTAGGAGCTTCTCCACGGATTCTTCCTTCGAGTTCAACCCTCAGTTGGAGACCATTCGCGAGACGGCGACTCACCAGCAAGGACTAAAGAAGAAGACGCCGAAACAGAAGAAGGCGAAGACGAAGAAGAAGACGAAAGCAAGACGGAGCGTGTCGTCTCCGGAGAGCGATTCGCCGGCGAGGCTATCGGTGTTTCAGAGGCTGATACCGTGCAGCGTGGAAGGAAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAAGTCAGAGGATCCGTACGAGGATTTCAGAAGGTCGATGATGGACATGATTTTGGAGAAGCAGATGTTTGAGGAGAGTGATTTGGAGCAGCTCTTGCACTGCTTCTTGTCTCTTAATTCCTCCAAACACCACGCCGCATTTGGCCTCGCCTTTGAGCCTTCAGTTGGTTCAGCTGTTGGTGGTCGTATATATCGTCTCATAGTTCAATCAATGGCCCTACGACTACGAGTCAGCAGCGAATCCGATGGATCAGCTTTGTTTTCTCGGGTTCGGAGGGTTACTGTTTTACAAACACGCGCAGCCAAATATCGGAACTTTGAGTTGATGTTACATGGGTTTCAAGTCCATCCAAGTTTCATAGATCCTGAGCAATTGCATGGAGGTATCTTTCTCTACTTCAACTATGAAGTATGA 1284 0.5125 MAKRFKFRISRVIPSFHSCRSKDPSTLPSNPVPSFLRLTQPKPKLIDSHFSTITPSPSPPPPFKAHHSSLRRHVSSAFVSVGCGFRSRATLSDDDRNETHHFHWEQEDKWHVVAKVYAADNTPRRKIYNSSVSGGSDDDDLLPLPPPLPRLPCDRKKKRRVKKKRTTPKFRISTSSADSYGLFSSDGCDDERDIDEEETETLVSSSRSFSTDSSFEFNPQLETIRETATHQQGLKKKTPKQKKAKTKKKTKARRSVSSPESDSPARLSVFQRLIPCSVEGKVRESFAVVKKSEDPYEDFRRSMMDMILEKQMFEESDLEQLLHCFLSLNSSKHHAAFGLAFEPSVGSAVGGRIYRLIVQSMALRLRVSSESDGSALFSRVRRVTVLQTRAAKYRNFELMLHGFQVHPSFIDPEQLHGGIFLYFNYEV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1478 427 Pfam Transcriptional repressor, ovate 292 341 IPR006458 -
Glsi05g1478 427 MobiDBLite consensus disorder prediction 126 215 - -
Glsi05g1478 427 ProSiteProfiles OVATE domain profile. 288 347 IPR006458 -
Glsi05g1478 427 NCBIfam uncharacterized plant-specific domain TIGR01568 286 341 IPR006458 -
Glsi05g1478 427 MobiDBLite consensus disorder prediction 235 252 - -
Glsi05g1478 427 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 126 341 IPR038933 GO:0045892
Glsi05g1478 427 MobiDBLite consensus disorder prediction 153 169 - -
Glsi05g1478 427 MobiDBLite consensus disorder prediction 227 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1478 Glsi-ChrGlsi05 63418028 63420692 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi05g1478 Ovate 4.6e-18 No_clan