Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1468 ATGTCTGATTCCTACCTTGCTCTCTGTTCTCTTTCATCCATTCTTGCTCTTCTCCTAATCTTCATTCTCGTCAAAAGAAAGCAACCCAGGCTTAATCTTCCCCCAGGCAAAATGGGTTGGCCTTTTCTGGGGGAAACTCTTGGGTATTTGAAGCCATACTCTGCTACTACAATCGGAGAGTTTATGGAGCAGCACATAGCAAGGTATGGTAAAATCTACAAGTCGACATTGTTTGGCGAGCCAGCGATAGTTTCAGCAGATGCAGGGCTCAATAGGTTCATATTTCAGAACGAAGGGAAATTGTTCGAATGCAGCTATCCAAGAAGCATCAGTGGAATACTTGGAAAATGGTCCATGTTGGTCTTAGTGGGTGACATGCACAGAGACATGAGGGCCATATCACTCAACTTTATGAGCAATGTCAGGCTCAGAACAACTCTGTTGAAAGACGTGGAGAAGCATAGCCTGCTTGTTCTAAGCTCATGGAAGGAAAATTCTAAATTTTCAGCTCAACAAGAAGCGAAGAAGTTCACCTTCAATTTGATGGCGAAACAAATCATGAGCATGGATCCTGAGAATCTTGAGACACAGCAACTGAAGAAAGAGTATGTCACTTTCATGAAGGGGGTAGTATCGGCGCCTTTGAATTTGCCCGGAACTGCATACAGGAAGGCATTACAATCTAGGTGCACCATATTGAAGTTCATAGAGGGGAAAATGGAAGAGAGAGTCCAAAATATCAAAGAGGGAAATGAAAGTTTGGAGGAAGATGACCTTCTAAACTGGGTCTTGAAGCATTCAACTCTTACAACAGAGCAAATTCTTGACTTGATTCTGAGCATGCTCTTCGCTGGTCATGAAACTTCATCGGTAGCCATAACTTTAGCTATTTACTTCTTGCCAGGTTGTCCTCGGGCCATACAGGAGTTAAGGAAAGAACATACGGAAATCGCGAGAGCCAAAAAGCAATCAGGTGAGATGCAATTGACTTGGGATGACTACAAACGAATGGAGTTTACTCACTGTGTTGTGAACGAGACACTTCGGCTAGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTATCAAAGACATTCGGTACAAAGGTTATGACATTCCATGTGGATGGAAAGTCCTTCCGGTGATTTCAGCGGCGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAAGGATGGTAGTGGTGGAAGCTGCTCAAGCGCGAACAACAACTTCATGCCGTTCGGGGGAGGGACAAGACTGTGTGCGGGATCGGAGTTAGCCAAACTTGAAATGGCGGTTTTCATCCACCATCTCATCCTCAACTACCGCTGGGACTTGGCTGATTCAGATCAAGCTTTTGCCTACCCTTTCGTTGATTTTCCCAAAGGCCTACCCATCATAGTCCAACGCCACTCTTTGACTTGA 1449 0.4486 MSDSYLALCSLSSILALLLIFILVKRKQPRLNLPPGKMGWPFLGETLGYLKPYSATTIGEFMEQHIARYGKIYKSTLFGEPAIVSADAGLNRFIFQNEGKLFECSYPRSISGILGKWSMLVLVGDMHRDMRAISLNFMSNVRLRTTLLKDVEKHSLLVLSSWKENSKFSAQQEAKKFTFNLMAKQIMSMDPENLETQQLKKEYVTFMKGVVSAPLNLPGTAYRKALQSRCTILKFIEGKMEERVQNIKEGNESLEEDDLLNWVLKHSTLTTEQILDLILSMLFAGHETSSVAITLAIYFLPGCPRAIQELRKEHTEIARAKKQSGEMQLTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKAIKDIRYKGYDIPCGWKVLPVISAAHLDPSLFDQPQHFNPWRWQKDGSGGSCSSANNNFMPFGGGTRLCAGSELAKLEMAVFIHHLILNYRWDLADSDQAFAYPFVDFPKGLPIIVQRHSLT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1468 482 CDD CYP90-like 65 478 - -
Glsi05g1468 482 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 FunFam Cytochrome P450 90B1 23 478 - -
Glsi05g1468 482 Gene3D Cytochrome P450 23 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Glsi05g1468 482 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 SUPERFAMILY Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 Pfam Cytochrome P450 34 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1468 482 Coils Coil 237 257 - -
Glsi05g1468 482 PANTHER CYTOCHROME P450 26 29 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1468 Glsi-ChrGlsi05 63329331 63332894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1468 25 405 Cytochrome P450 AT3G50660 73.881 0.0 628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1468 05 63329331 63332894 Glsi09g0557 09 3866267 3869849 CCT
Glsi05g1468 05 63329331 63332894 Glsi05g1468 05 63329331 63332894 ECH