Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1431 ATGCTATCTTTTAGCGGTTCTCATGAAATTTGTTCTGGGTCATGTTTCTTTTCAGTTGGGGTTTTGCACAACTTTGCAAAAATGAATGATCTGATGACGAAATCATTCTTAAGTTATGTTGAACTCAAGAAACAGGTCCAGAAGGACATGGAAGCCGACTTTGACCTTGAAGCAGGGCAACTCAACTCCATTGAAGACCGTAACCTCTCTCAATTCTTCCAAGAAGTTGATGCAATCAAGGCTGAAATGGAGGAGATTACCAATCTCTTATTTGATCTTCAACACCTGAATGAAGAGTCAAAATCCACCCACAGTGCCAAAGTTCTTCGTGGGCTAAGAGACCGGATGGAGTCTGACATGGTTGCCGTTCTTCGTAAAGCAAAGATTATTAAGGCAAGGCTAGAAGGGCTTGACCAGTCTAACATAGCCAATCGCAGAATATTAGAGGCCTATAAAGAAGGAACCCCGATTGATAGAACAAGAATATCAGTCACAAATGGTTTAAGAGTCAAGCTCAAGGACTTGATGAATGACTTTCAGTCCTTGAGAGACAAGATTCTATCTGATCACAAGGAAGATCTAAGGAGAAAGTACTATACGGCAACTGGTGAGATACCAAGTGACGAGGTCATTGAGAAGATGATTGCTGGGAGTCTGAAAGTTGAATTTTTTGCCGGAAAAACAGAGGCTGATATGGGTACCCAGGTTCGGCACGAGGCTGTGTTAGATATCCAGAGAAGTTTGGATAAGCTTCACCAGGTTTTTCTTGATATGGCTATTCTGGTTGAGACACAAGGCGAAAAGGTGGATAACATTGAAGATAATGTAGTCAATGCCAGAAATTTCGTTCATGGTGGAACTAATAGCCTTTACTATGCCAATCAGATGAAGAAGAGGAACAAAAAATGGATCTGGTGGGTTTGCGCTGTGGGGCTGATTATACTATTGGTGTGCATAATTGCAACTTTAACTTCTTGA 978 0.4141 MLSFSGSHEICSGSCFFSVGVLHNFAKMNDLMTKSFLSYVELKKQVQKDMEADFDLEAGQLNSIEDRNLSQFFQEVDAIKAEMEEITNLLFDLQHLNEESKSTHSAKVLRGLRDRMESDMVAVLRKAKIIKARLEGLDQSNIANRRILEAYKEGTPIDRTRISVTNGLRVKLKDLMNDFQSLRDKILSDHKEDLRRKYYTATGEIPSDEVIEKMIAGSLKVEFFAGKTEADMGTQVRHEAVLDIQRSLDKLHQVFLDMAILVETQGEKVDNIEDNVVNARNFVHGGTNSLYYANQMKKRNKKWIWWVCAVGLIILLVCIIATLTS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1431 325 Coils Coil 69 99 - -
Glsi05g1431 325 Gene3D - 227 324 - -
Glsi05g1431 325 SMART SynN_4 64 191 IPR006011 GO:0016020
Glsi05g1431 325 FunFam Syntaxin 132 226 324 - -
Glsi05g1431 325 CDD SNARE_syntaxin1-like 235 290 - -
Glsi05g1431 325 Pfam Syntaxin 71 266 IPR006011 GO:0016020
Glsi05g1431 325 CDD SynN 69 226 IPR006011 GO:0016020
Glsi05g1431 325 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 66 197 - -
Glsi05g1431 325 PANTHER SYNTAXIN 66 315 IPR045242 -
Glsi05g1431 325 SMART tSNARE_6 226 293 IPR000727 -
Glsi05g1431 325 Gene3D - 65 194 - -
Glsi05g1431 325 SUPERFAMILY t-snare proteins 67 286 IPR010989 GO:0016020|GO:0016192
Glsi05g1431 325 Pfam SNARE domain 267 317 IPR000727 -
Glsi05g1431 325 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 231 293 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1431 Glsi-ChrGlsi05 63069010 63069987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1431 28 325 SNARE and Associated Proteins AT2G18260 59.283 3.75e-130 372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1431 05 63069010 63069987 Glsi05g1431 05 63069010 63069987 ECH