Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1409 ATGGTGCTGAATCTATCAAGAGAAGAGCTCATATTCCTTGTGCAGAACTACCATGACATGATCTTGGTTGCGCTTTTCTCTATTGGAGTAACATATTTTGCTTCAAAAGCATGGAGAAGAGTTGGAAAGGAGAAAGATGATATACCTGGCCGGCTCGGAATACCTTTTGTAGGAGAAACTTTGGCTTTTCTTTCAGCAACTAGTAGTACCAGAGGATGCTATGATTTTGTCAGGCTTCGGCGATTGTGGTATGGAAAATGGTTCAAGACACGGTTATTCGGCAAGATCCACATCTATGTTCCAAGTCCAGAAGGTGCAAAGACGATATTCACAAATGATTTTGTTCAATTCAACAAGGGTTATGTAAAATCAATGGCAGATGCTGTAGGAGAGAAAAGCTTGCTATGTGTACCTGTTGAAAGCCACAAGAGAATTAGGCGCCTTCTATCTGAACCATTCTCCATGAACTCTTTATCTTCCTTTGTCAAGAAATTTGATCAAATGTTGTGTGGGAGGTTGAAAAAATTAGAAGAAACTGGGGAAAGCTTCAAGGTGCTGGAATTCAGTATGAAGATGACATTTGATGCAATGTGTGACATGCTGATGAGCATCACGGAGGACTCATTGCTGGAGCAGATTGAGAAAGACTGCACTACCGTCTCTGATGCCATGTTATCTTTTCCAATCATGATTCCTGGTACCAGATACTATAAGGGCATCATGGCTCGTAGAAGGCTTATGGAAACCTTCAGAGAGATCATAGACAGGCGTAGGAGGGGAGATGAAGCTCGAGAAGACTTCCTTCAGTCCATGCTAAAGCGAGATTCATACCTTTCCACTGAAAAGCTTGATGATTCAGAGATTATGGATAACCTTTTGACACTGATAATTGCAGGACAGACCACCACTGCTGCAGCTATGATGTGGAGTGTGAAGTTTCTTGACGACAACAGGGAAGCCCTGCACATACTCAGGGAAGAGCAATTGTCATTAATCAGAAAGAAGCCAGACGGAGCTTCACTTACTCTTGGAGATCTCAACAGCTTGCCTTATGCTTCCAAGGTAGTTAAGGAAACACTCAGAATGTCCAATGTCCTGCTGTGGTTTCCTCGGGTTGCACTTGAAGACTGCATAATTGAAGGCTACAAAATAAAGAAAGGATGGCATGTTAACATCGATGCAACTTGCATTCATCACGACCCAGATTTGTTCAAGGACCCATTCAAATTCAACCCATCAAGATTCGATGAAATGCAAAAGCCGTACAGCTTCGTACCTTTCGGTTCAGGGCCAAGGACTTGCTTAGGGATCAATATGGCGAAGGGGACAATGTTGGTGTTTTTACATCGATTGACTGGTGGTTATACGTGGACCCTTGAAGATTTAGACACTTGCCTTGAAAAGAAAGCACACATACCTAGACTAAGGAGTGGCTGTCCCATAACATTGAAGTCCTTAAGGGACTGCATGCAAGAAGCATAG 1482 0.4285 MVLNLSREELIFLVQNYHDMILVALFSIGVTYFASKAWRRVGKEKDDIPGRLGIPFVGETLAFLSATSSTRGCYDFVRLRRLWYGKWFKTRLFGKIHIYVPSPEGAKTIFTNDFVQFNKGYVKSMADAVGEKSLLCVPVESHKRIRRLLSEPFSMNSLSSFVKKFDQMLCGRLKKLEETGESFKVLEFSMKMTFDAMCDMLMSITEDSLLEQIEKDCTTVSDAMLSFPIMIPGTRYYKGIMARRRLMETFREIIDRRRRGDEAREDFLQSMLKRDSYLSTEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLDDNREALHILREEQLSLIRKKPDGASLTLGDLNSLPYASKVVKETLRMSNVLLWFPRVALEDCIIEGYKIKKGWHVNIDATCIHHDPDLFKDPFKFNPSRFDEMQKPYSFVPFGSGPRTCLGINMAKGTMLVFLHRLTGGYTWTLEDLDTCLEKKAHIPRLRSGCPITLKSLRDCMQEA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1409 493 PANTHER CYTOCHROME P450 26 49 459 - -
Glsi05g1409 493 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Glsi05g1409 493 Pfam Cytochrome P450 50 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 SUPERFAMILY Cytochrome P450 38 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 Gene3D Cytochrome P450 40 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1409 493 CDD CYP90-like 80 483 - -
Glsi05g1409 493 FunFam cytochrome P450 90A1-like isoform X1 38 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1409 Glsi-ChrGlsi05 62967790 62970839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1409 49 455 Cytochrome P450 AT1G19630 46.959 2.93e-131 386