Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1392 ATGATGCCTGAACGAGCCAAGCTGCACATAGTCTTGACGTTTTCACAATTTTGTCATGCAGGAAGCCATGTCTTTCTGCGAATTGCACTTAATATGGGCGTAAGCAAGCTGGTCTTTCCTGTTTATCGAAACACTATTGCTCTAGTTCTTCTGGGTCCCCTTGCATATTTTTCAGAGAAGAACCAAAGGCCATCACTAACAACTTCTTGTTCGATACATTTCTTCCTGCTTGGACTTGTTGGAATAACAATGAAAGAGGGATTCTACCTCGTGGGTTTAGAAAACACATCGCCTACATTTGCTTCTGTTATGCAGAATTCTGTTCCGGCTCTAACCTTTCTCATTGCTGCAATATTTAGGCAAGCTATAATGAATACCTAG 381 0.4147 MMPERAKLHIVLTFSQFCHAGSHVFLRIALNMGVSKLVFPVYRNTIALVLLGPLAYFSEKNQRPSLTTSCSIHFFLLGLVGITMKEGFYLVGLENTSPTFASVMQNSVPALTFLIAAIFRQAIMNT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1392 126 Pfam EamA-like transporter family 12 120 IPR000620 GO:0016020
Glsi05g1392 126 PANTHER WAT1-RELATED PROTEIN 10 117 IPR030184 GO:0016020|GO:0022857
Glsi05g1392 126 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1392 Glsi-ChrGlsi05 62855726 62856306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1392 2 120 Nodulin-like Gene Family AT1G75500 63.866 7.43e-48 156