Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1391 ATGAAAGCGAAGTGCAGATTTGAGAGCGTACACGTGTGCAGGATATCTGGTTTGGCTAAGGTCCTTGGAGTCCTTGCTTCTGTTGCAGGAGCTACAGTTATTACCCTTTTCAAGGGCCCTACCATTTATACTCCACATTCAACCTTACATCAGAAACACCTGTTGCCTTTATTGGGGGATGCCAAGGGGAAGAACTGGGCCTTGGGTTGCATCTGTCTATTTGGTCACTGCCTATCTTGGTCTGGCTGGATTGTTATGCAAGCATCTGTCCTCAAAAAATACCCAGCCCCCCTCTCAGTTTCTGCCTTTACTTGCTTCTTTGGTATGTTGCAGTTTCTAACACTTGCAGCCTCCTTTGAGAAAGATTCTCGAGCATGGCAGCTTAACTCTAGTGGCGAAATCTACAGTCTTCTCTACGCGGGAGTGGTGATTTCAGGGCTAGCGGCAGCGTTACAGATATGGATTATTGGCAAGGGAGGGCCAGTGTTTGCTTCAGTTTATCTGCCTGTACAGACAATAATTGTAGCTTTAATCGCATCTATTGCTTTAGGTGAAGAATTCTTCTTGGGAGGGATTATCGGAGCTATCTTGATCATATCTGGATTAAACCTTGTTGTCTGGGGAAAAGGTGAAGAAATCAAGTCTGGCAAAGAGGTAGGAGTCCCATGTGCTCCCAAGAAGCATTTGGAAGAAAATGGTGATAACTCTTCCCTCATCCAACCATTGATTCCACCACAAACTCCTTAG 747 0.4552 MKAKCRFESVHVCRISGLAKVLGVLASVAGATVITLFKGPTIYTPHSTLHQKHLLPLLGDAKGKNWALGCICLFGHCLSWSGWIVMQASVLKKYPAPLSVSAFTCFFGMLQFLTLAASFEKDSRAWQLNSSGEIYSLLYAGVVISGLAAALQIWIIGKGGPVFASVYLPVQTIIVALIASIALGEEFFLGGIIGAILIISGLNLVVWGKGEEIKSGKEVGVPCAPKKHLEENGDNSSLIQPLIPPQTP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1391 248 Pfam EamA-like transporter family 68 206 IPR000620 GO:0016020
Glsi05g1391 248 PANTHER WAT1-RELATED PROTEIN 7 213 IPR030184 GO:0016020|GO:0022857
Glsi05g1391 248 MobiDBLite consensus disorder prediction 234 248 - -
Glsi05g1391 248 MobiDBLite consensus disorder prediction 226 248 - -
Glsi05g1391 248 SUPERFAMILY Multidrug resistance efflux transporter EmrE 130 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1391 Glsi-ChrGlsi05 62854384 62855672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1391 1 247 Nodulin-like Gene Family AT1G75500 54.924 8.57e-92 274