Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1381 ATGGATATAGTGGGGGAGGTAGAAGAGAGCCTTAGAGAGTTGAGAGAATACTTCAAGAGTGGAAATAGCAGAAGTGTGAAATGGAGGAAAACCCAGATCACAGCACTCCTCCAACTTCTTCATGACAACGAAGATGCTATCTTTAAGGCTCTCCACCAAGATCTTGGAAAGCACCCCGTTGAATCTTACCGCGACGAGATTGGTGTTGTAGAAAAATCAGCCAACAACTCTTTGAGCTGCGTTGAGAAATGGATGGCTCCCAAACAGAGTCACATACCTTTACTTTTCTTCCCAGGAAGAGGAGAGGTACTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCTATCTCTCTAGCACTGGATCCATTAATTGGAGCAATATCTGCAGGAAATGTAGTGCTCATAAAAACTTCAGAGCAAGCTCCAGCATGCTCTTCCTTTCTAGCCAGCACCATTCCTCAATACTTGGACTATAAGGCCATCAAGGTGATTGAAGGTGGAGCAGATGTCAGTGAACAACTACTGCAGCAGAAATGGGACAAAATATTCTTCACTGGAAGTCCAAGAGTGGCAAGCATTGTCATGTCTGCTGCTGCAAAGAATTTAACTCCCGTTACTCTAGAGCTGGGTGGAAAATGCCCTGCCATTCTTGATTCCCTTTCCAATCCTTCAGATTTTCAGTTGGCAGTCAAACGAATCGTAGGAGGGAAGTGGGGGCCATGTAGCGGACAGGCATGTATAGGAATAGACTACGTGCTCGTTGAGGACAAGTTCAAACATGTTCTGATAGATTCATTGAAGAAGACAATCAGGAAATTCTATGGGGACGACCCAAAAGAGTCAAAGGTGATTGCCAGAATTGTAAACAAGCAGCACTTTCAGAGATTATGCAGTCTTCTTAAAGAACCTCTGGTTCTCGCTTCCATTGTTCATGGTGGTACAGTCGATGAGGAGAAACTGTTCATTGAGCCCACAATCTTGTTAGATCCTCCGCTAGATGCTCAGATAATGATGGAAGAAATCTTTGGTCCACTGCTTCCAATAATCACTATGAATAAAGTTCAGGAAAGCATAGAATTCATAAATTCCAGGCCAAAACCTCTTGCCATTTATGCCTTCACCAAAGACGAAACTTTGAAGAAAAAGATTCTATCAGAAACGTCCTCGGGAAGCGTCACATTTAATGACACAATGGTCCAATTTCTATGTGATGCACTACCATTTGGAGGCGTTGGCCAAAGTGGGTTTGGAAGGTATCATGGGAAGTACTCGTTTGACACTTTTAGCCACGAAAAAGCTGTGATGCATAGAAGTCTATGCCTTGAAATCGAGCCAAGGTACCCTCCTTGGAGTAAGTTCAAGCTGCAGTTTATCAGATTGGCATACAGACTGAACTATTTTGGACTATTACTGCACATTCTGGGTTTGAAAAAATACAACTAG 1458 0.4314 MDIVGEVEESLRELREYFKSGNSRSVKWRKTQITALLQLLHDNEDAIFKALHQDLGKHPVESYRDEIGVVEKSANNSLSCVEKWMAPKQSHIPLLFFPGRGEVLSEPLGVVLIFSSWNFPISLALDPLIGAISAGNVVLIKTSEQAPACSSFLASTIPQYLDYKAIKVIEGGADVSEQLLQQKWDKIFFTGSPRVASIVMSAAAKNLTPVTLELGGKCPAILDSLSNPSDFQLAVKRIVGGKWGPCSGQACIGIDYVLVEDKFKHVLIDSLKKTIRKFYGDDPKESKVIARIVNKQHFQRLCSLLKEPLVLASIVHGGTVDEEKLFIEPTILLDPPLDAQIMMEEIFGPLLPIITMNKVQESIEFINSRPKPLAIYAFTKDETLKKKILSETSSGSVTFNDTMVQFLCDALPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRSLCLEIEPRYPPWSKFKLQFIRLAYRLNYFGLLLHILGLKKYN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1381 485 FunFam Aldehyde dehydrogenase 15 219 - -
Glsi05g1381 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Glsi05g1381 485 Pfam Aldehyde dehydrogenase family 7 439 IPR015590 GO:0016491
Glsi05g1381 485 PANTHER ALDEHYDE DEHYDROGENASE 6 476 IPR012394 GO:0006081
Glsi05g1381 485 FunFam Aldehyde dehydrogenase 216 419 - -
Glsi05g1381 485 SUPERFAMILY ALDH-like 6 454 IPR016161 GO:0016491
Glsi05g1381 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Glsi05g1381 485 PIRSF ALDH 2 480 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1381 Glsi-ChrGlsi05 62805768 62808585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1381 7 483 Aldehyde Dehydrogenase Gene Family AT4G36250 65.199 0.0 677