Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi05g1372 | ATGGAACAACCAGATGAACAGCTACACGACCCCTCCCTTCGACAAGGGGAAAGACAAAGCTTTAACTGTTCGGATACCTCTACGGAGCCGATGAGCATCGATCCATGCCAGAGTATTAGGGGTATGCAGGATTCTCAGCTTGCTGGAGTTCCGGTCTCACTTGCTCGCGATGTTGACCTGCCTGACACACATGATCGTTGCTTGCCCAATATGGACCTGAAGATAGAGGTCAAGCTTCCGGACGGTTGTGCCGGGAAAAGAAAACGAGGTCGGCCGGCGAGGGGTGTCCCGAAAACACCGCCATTGAGGAAGAAGAGGGACGAGGAGGATGTTTGTTTTATTTGTTTCGATGGCGGGAGCCTTGTTCTCTGTGATCGCCGGGGTTGCCCTAAAGCGTATCATCCCGCATGTATTAAGCGAGACGAGTCATTCTTCCGTTCCAAGGCCAAATGGAATTGCGGTTGGCATATATGTAGCATTTGTCGGAAAGCATCCCATTATATGTGCTATACTTGTACATATTCTTTGTGCAAGGGTTGTACAAAAGATGCAGATTATCTCTGTGTTCGAGGAAATAAAGGTTTATGTGGAATATGCATGAGAACTATAATGCTTGTTGAGAACAGTGCACAGGGAAATAAGGAAATGGTAATGCTAAACTTTCCTGTCTTGGCTGGTCACTTGTGTGAAGTGGATTTTGATGACAAAAGCAGCTGGGAGTATCTCTTCAAGGTGTATTGGGTATACTTGAAAGAGAAGCTATCTTTATCGTTAGATGAGCTCCTTCGAGCTAAAAGTCCGTGGAAAGGAGCTGCTGCTATGGGTTGTAAGGTCGAAGTTCCCCATGAACCTCCTCTTCATAAAGATGACAAAGGTTCCGGTTCTGAAAATTCTTGTATAGACATAGAATCAAATAATTTAGAAGACAATAAGTCTATAAGACAGCCAAGGCTTCTTAGTAAAGAGGATTGCGCAAATATGAAAACTTCAGGTGGTGACAATGGTGTGTCTATGGCTGAATGCACAAAATGGGCATCAAAGGAGCTTTTAGAGTTTGTTGCACATATGAAAAATGGTGATACATCTCTGCTATCTCAATTTGATGTCCAGGAACTTTTACTGGAGTATGTAAAGAAAAACAATCTTCGTGATCCTCGACAAAAATGCCAAATTGTTTGTGATTTAAGGCTAGCAAATTTGTTTGGGAAAGCACGTGTAGATCACATTGAAATGTTAAAGCTTCTTGAATATCACTTTCTTATAAAAGATGATGCCTCTGCCAATAATACTGTAAGATCAGGAATTATTGATGCTGTTGTTAGCGAGGTTGAGGCTAATGACAATCACAATAGCCAGCTGGTGGTAGCTAATGATAAGAGATGTAAAACACGTAAAAAGGCTGATGTGCGTGTGCTGCACAATAAACCAAATGCACCTGCTGCAATAAATGCTCATAACATCAGCTTGATTTACTTGCGCCGCAATCAGATGGAGAATCTACTTGAAGATGCTGAGAAGTTTAATGACAAGGTTGTTGGTTCAATTGTCCGGATAAGAATCTCTAGTAGTGATAAAAAGCAAGAGATGTATAGGCTTGTCCATGTTGTAGGTACAAGAAATGCTGCTGAACCATACAATATTGGCACAAGAACAACAGACATGGTGCTTGAAATTTTAAATTTAAACAAGAAAGAGGTCATACCAATAAATGAAATTTCAAATCAGCAGTTCTCTGAGGACGAATGTAGACGTTTACGCCAGAGTATAAGATATGGGTTTTCACAGAGATTGACTGTGGGAGAGATTCTGGACAAAGCATTGATACTTCAAGCAGTGAGAGTTAATGATTTGCTGGAAGCTGAAATATTGCGGCTTAACCATCTTCGTGATAGAGCAAAGTGCGTGGAGAAATTTCAGTTATTGAACTCACCTGAGGAACGACAAAGAAGGCTTCAAGAAATTCCAGAAGTATACTCTGATCCGAATATGGATTCAATCTCTGAGTCTGATGAAGATGCTGAAAAGTCAGATGAAAAACAAGATTACAATATAAGGTCAAAATATTCTGGATTTAATAGAAGAGAAAGGGAGCCTAGTTCACCAAGAAGTCAGGGTGGTGTATTAAATGATGTTGGATGCAGAGCACAAGACTTTTTGGCCACCACCCAGGAGCAGATTGGGAATATATGTACAATAAAGAACCGGACCAGCACCAATGATGCAGCAATTGGTGATAGCAATAATGTAGGAGTGGCGACATCAGGAACATCTGGTCGAGCATCAGAAATTTCATCATTGCCTCTCTCTACAGGGATGGAGCAGCCATTTAATGATTTTGAAACCAATAAATTATGGCACTATCGGGATCCATCTGGGAAGGTTCAAGGACCTTTTTCTATGTTGCAATTGTATAAGTGGAATGCAAGTGGACATTTCCCTCCTGATCTCAGAATATGGAGGATAACTGAAAAACAAGATGACTCTATATTGTTGACTGATGCATTAAGTGGGAAGTGTTGTAAAAATGAGTCATTTCCATACAACAGCCAACTGCTGTCTTTAGGGGTCAGGGATGCATTGGGTAATAAAGATGATATTGATTTTCCCAGTCCCACTCCTGTAACTAGTTCCTCAAATTGCTGGGATTCCACGTCTACCTTTGTTCCTGTTTCAAAAACATCACCAAAAAACCCAGAAAGTGATAACCTAGAGTTGCCTAGTCACACCCCTAAGCCAAATAATTCTGAGTCCGTATGTCAGTCTGCCGAAAACAAACAGTCTGCTTCTTCAAATGTTCCTGTTCAAGATGCTGGTCCTAGCTGGAGTACTGCTTCCAGCTTAGTTGGTGGTGGGACACCACTTCCTGAAGTGACTGTTGAATGGAGAAGATGTTCACCAGCCCCACCTAATCCTTCTGTTGAGGAATGGGACTCCAATCTTGTCTCTGCATCTTCATTGAAGCAAGCTGAAAATGTTGGTGATTGTACTGCTACTCCATCTTCAATATGTGATCAACTAACACACTCTTCCCCTTCCCATGCTGTCTGTAATACGTCTACATGGCAGGCAATTGATTTTGGCGATGAATCAGTTTCTGATCTGTTGGCAGAAGTGGAGGCAATGGCATCTCTTGGTGGCTTGGAATCTCCCACATCGATTATGAATTGTGGTGAGGAATTGACCGAGGGTTCTAAAACTGATTGTCTGAGTTCTGCAGAGGGGCTTAGCCCTATGCCTGATGCAGGTAAAGGTGATGCGCTGAGCTCCACAGGTGATTTACAATTTCCATCTCAATCCACAGCAGCAGATGTACCATTATGCCAAGCAGATGCACATCACCATCAAAGAATATCTGGAGGGCATTCCTCTAGAAGTTCTGAAGTTGAGGTTGGCACAAAGGACATTTGTGTTTCAGGTAATCAGTGGAAATCAGGTTCAGAAAGTTCATCCACAGCAACTTGGGACATGGCTACAGATACCACTTGGAGACTTGGGTCAGAGAGTACACGTGGTTGGGAGGCATCTCAGGGAAATACAAACTTGGGCTGGGGTGGTATGGATCAAGGAAATGCAAACTTGAGTTGGGGAGTGGGACACGGGACAGTGCAGGAAAACAGGAGCATAAACACGTACACTTCCATAGGAACTCCTTGCCTTTTGGGAAGCCAAACAAGATATGGCAGTGGCAGTGGCAGTGGCGGTGGCAGTGATCGATTTTCTGCTCCCAGAGATTGGGATTTTCATGGTTCTGGTAGGGGTAGAACAGTGTGGAACAGGCAACCATTATTTGGTATTGGAAATGGAGGCTCCCAAAGGCCTCCGCCTAAAGGGCAGCGAATTTGTAAATTTTACGAAAGTGGGCACTGTAAGAAGGGAGCATCATGTGATTACTTGCACCCATGA | 3903 | 0.4302 | MEQPDEQLHDPSLRQGERQSFNCSDTSTEPMSIDPCQSIRGMQDSQLAGVPVSLARDVDLPDTHDRCLPNMDLKIEVKLPDGCAGKRKRGRPARGVPKTPPLRKKRDEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDESFFRSKAKWNCGWHICSICRKASHYMCYTCTYSLCKGCTKDADYLCVRGNKGLCGICMRTIMLVENSAQGNKEMVMLNFPVLAGHLCEVDFDDKSSWEYLFKVYWVYLKEKLSLSLDELLRAKSPWKGAAAMGCKVEVPHEPPLHKDDKGSGSENSCIDIESNNLEDNKSIRQPRLLSKEDCANMKTSGGDNGVSMAECTKWASKELLEFVAHMKNGDTSLLSQFDVQELLLEYVKKNNLRDPRQKCQIVCDLRLANLFGKARVDHIEMLKLLEYHFLIKDDASANNTVRSGIIDAVVSEVEANDNHNSQLVVANDKRCKTRKKADVRVLHNKPNAPAAINAHNISLIYLRRNQMENLLEDAEKFNDKVVGSIVRIRISSSDKKQEMYRLVHVVGTRNAAEPYNIGTRTTDMVLEILNLNKKEVIPINEISNQQFSEDECRRLRQSIRYGFSQRLTVGEILDKALILQAVRVNDLLEAEILRLNHLRDRAKCVEKFQLLNSPEERQRRLQEIPEVYSDPNMDSISESDEDAEKSDEKQDYNIRSKYSGFNRREREPSSPRSQGGVLNDVGCRAQDFLATTQEQIGNICTIKNRTSTNDAAIGDSNNVGVATSGTSGRASEISSLPLSTGMEQPFNDFETNKLWHYRDPSGKVQGPFSMLQLYKWNASGHFPPDLRIWRITEKQDDSILLTDALSGKCCKNESFPYNSQLLSLGVRDALGNKDDIDFPSPTPVTSSSNCWDSTSTFVPVSKTSPKNPESDNLELPSHTPKPNNSESVCQSAENKQSASSNVPVQDAGPSWSTASSLVGGGTPLPEVTVEWRRCSPAPPNPSVEEWDSNLVSASSLKQAENVGDCTATPSSICDQLTHSSPSHAVCNTSTWQAIDFGDESVSDLLAEVEAMASLGGLESPTSIMNCGEELTEGSKTDCLSSAEGLSPMPDAGKGDALSSTGDLQFPSQSTAADVPLCQADAHHHQRISGGHSSRSSEVEVGTKDICVSGNQWKSGSESSSTATWDMATDTTWRLGSESTRGWEASQGNTNLGWGGMDQGNANLSWGVGHGTVQENRSINTYTSIGTPCLLGSQTRYGSGSGSGGGSDRFSAPRDWDFHGSGRGRTVWNRQPLFGIGNGGSQRPPPKGQRICKFYESGHCKKGASCDYLHP | 1300 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi05g1372 | 1300 | SMART | swib_2 | 337 | 424 | IPR019835 | - | |
| Glsi05g1372 | 1300 | SUPERFAMILY | CCCH zinc finger | 1275 | 1299 | IPR036855 | GO:0046872 | |
| Glsi05g1372 | 1300 | ProSiteProfiles | GYF domain profile. | 782 | 836 | IPR003169 | GO:0005515 | |
| Glsi05g1372 | 1300 | SMART | rtf1 | 481 | 591 | IPR004343 | GO:0003677 | |
| Glsi05g1372 | 1300 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED | 872 | 1300 | - | - | |
| Glsi05g1372 | 1300 | MobiDBLite | consensus disorder prediction | 14 | 33 | - | - | |
| Glsi05g1372 | 1300 | CDD | GYF | 782 | 837 | IPR003169 | GO:0005515 | |
| Glsi05g1372 | 1300 | MobiDBLite | consensus disorder prediction | 281 | 300 | - | - | |
| Glsi05g1372 | 1300 | FunFam | Zinc finger CCCH domain-containing protein 19 | 101 | 201 | - | - | |
| Glsi05g1372 | 1300 | MobiDBLite | consensus disorder prediction | 653 | 708 | - | - |
Showing 1 to 10 of 36 entries
Duplication type information
Functional genes information
Transcription factors information