Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1364 ATGGTCATGCCTCCTCCTCTTCTTCTTCTTCTGGTGCTCTGCGCACCTCTCTTATCGTGCGCCACCCGCAGCGCCGTCACCATTGCTGAGATCGGAGCCTTGACCGCCTTCAAGCTCAATCTTCACGATCCTCTAGGCGCTTTCAGCGCCTGGGATCCCTCCACGCCGGCGGCTCCTTGTGACTGGCGTGGAGTTTCCTGCAACAACAACCGAGTCACTGAGCTCCGCTTGCCTCGGCTTCAACTCAGTGGCCGGCTCACTGACCGCCTTTCGGACTTGCGCATGTTACGAAAGCTGAGCCTCCGTTCCAACTCCTTCAACGGAACTATTCCTTCGTCGCTTTCCAAATGCGCGTTCCTACGTGCAGTATTTCTGCAGTACAACTCACTCTCGGGCAACCTTCCGCCCGAGATTGGAAACCTCACTGGTCTTCAGATTCTTAATGTCGCCCAAAATCATCTCTCCGGCAGCATCCCCGGTGACCTCCCATTGAGTCTGAAGTACGTCGACCTCTCGTCGAACTCTTTTTCTGGCGAGATTCCAAGTACCATTGCCAATCTTTCTCAGCTTCAGTTAATCAACCTGTCGTACAACCAGTTCTCGGGTGAGATTCCGGCGAGCTTCGGAGAACTTCAGTTGCTCCAATACCTCTGGCTTGATCACAATCTTTTAGGAGGAACTCTGCCTTCGGCACTCGCTAATTGCTCTTCGCTCGTGCATTTGAGCGTAGAAGGAAATGCACTTGGAGGAGTCATCCCGTCGGCCATTGCAGCTCTTCCGAAGCTTCAGGTGATATCCCTCTCGCAGAATAACCTTACTGGTTCAATCCCGGCGTCCATTATCTGCAATATTTCATTCTATATGCCGTCGCTTCGAATCGTTCAACTAGGATTTAATGGTTTCACGGATATTGTTTGGCCCGAGGCCTCAACGTGTTTCAGTGTTGTTCAGGTCTTGGATATTCAGCACAATAACATACACGGCAGGTTTCCCTTGTGGATAACGACTGTACCCACCTTAACCATGCTTGACGTTTCGAGTAATGCACTTTCTGGTGACCTTCCGCCAGATATAGGAAACCTCACGAAATTGGAGGAGTTAAAGATGGCCAACAATTCATTCACTGGCATGATTCCGGCGGAAATCAAGAAATGTGGATTCCTTCGTGTTGTGGATTTTGAAGGCAACCGATTTGCCGGAGAAGTGCCTTCGTTTTTTGGTTATATGACAGGTCTGAAGGTGCTGTCCCTTGGTGGGAATCTTTTCTCTGGTTCAGTTCCGGGGAGTTTTGGCAACCTTTTGGCGCTTGAAACCTTGAGTTTGAGAGGTAATAGCTTGAATGGAACTATGCCTGAGGAACTGATAGGATTGAGTAATTTGACGACACTTGACCTTGGTGGAAACAAGTTTACGGGTCAAATTTCTGCAAGTATTGGGAACCTGAGTAGATTAATGGTTCTCAATCTGAGTGGCAATGGCTTTTCCGGAAAAATTCCGGGTAGCTTGGGGAATCTTTTCAGGCTAACTACACTGGACTTGAGCAAACAAAATCTTTCTGGGGAATTACCATTTGAGCTTTCAGGATTACCGAATCTGCAAGTTATTGCTCTGCAGGAGAACAAATTATCTGGGGATGTCCCTGAAGGGTTTAGCAGTTTGACGAGTTTGCGACATGTGAACCTAAGCTCTAATGCTTTTTATGGGCATATTCCTGAAAATTATGGCTTTCTTCGATCACTAGTCGTTCTTTCATTGTCTGACAATCACATTACAGGGATAATTCCTCCGGAGATTGGAAACTGCTCTGATATTGAAATTCTTGAGCTCGGTTCAAATTCTTTGACGGGTCATATTCCAATTGATCTCTCTCGACTCTCCCATTTGAAAGTGCTTGATGTGAGTAGGAACAATTTAACTGGAGATATGCCTGGGGATATCTCCAAATGTTCGTCCTTAACTGCTCTGTTTGTGGATCACAATCGTCTTACGGGTACCATACCAGAGTCACTGTCTGATCTGTCAAACTTGACCATGCTGGATCTCTCTGCAAACAACTTGAGTGGAGAAATATCGAGTAATATTTCTATGATCCCTGGTTTAGTGTACTTCAATGTCTCGGGGAATAACCTGGAAGGTGAAATACCGCCGATGTTGGGTTCTCGTTTTAACAATCCATCGGCGTTTGCTGATAATCAGAACTTATGTGGGAAGCCATTGGATAAGAAGTGTGAAGATATGGTCGCTAAGGACAATAAAAGGTTGATTGTGTTGATTATCGTAATTGTTGTTGGTGCTTGCTTACTGGCACTGTGTTGCTGCTTCTACATTTTCAGTCTATTGAGGTGGCGTAAAAGGCTTAAAGAAGGGTCTTCTGGGGAGAAGAAAAGGAGTAGTCCTGCTAGGGCGAGTTCTGGAGCTAGTGGAGGTCGAGGTAGCACAGATAATGGCGGACCAAAACTCGTCATGTTCAATACCAAAATTACACTTGCCGAAACAGTTGAAGCAACTAGGCAATTCGATGAAGAAAATGTGCTGAGCAGAACAAGGTATGGGTTGGTGTTCAAGGCCTGCTACGGCGATGGAATGGTGCTTTCAATTCGCAGGCTCCCAGATGGATCACTGGACGAAAATATGTTTAGGAAAGAAGCAGAATCACTAGGAAAAGTAAGACACCGGAATTTAACCGTTCTTAGAGGGTATTATGCTGGGCCACCTGACTTGAGGCTCTTGGTCTATGATTACATGCCTAATGGAAATCTTGCGACCCTCCTCCAAGAAGCTTCTCACCAAGATGGCCATGTTCTAAATTGGCCAATGCGCCACCTCATTGCGCTTGGAATTGCCCGTGGCTTAGCCTTCCTACATCAATCCTCGACGGTTCATGGGGACGTGAAACCGCAAAATGTCCTGTTCGATGCAGATTTTGAAGCTCATTTGTCAGATTTTGGCCTCGACCGTCTAACAGTAGCCACCCCTGGCGAACCGTCCACTTCAACTTCAGTTGGCACATTGGGTTACGTATCCCCAGAAGCCGTATTAACCGGGGAAGCCACGAAAGAGTCTGATGTCTACAGCTTTGGCATAGTGTTGCTCGAACTTCTCACAGGAAAGCGACCAGTGATGTTCACACAGGATGAAGATATAGTTAAGTGGGTCAAGAAACAACTGCAACGGGGTCAAATTACGGAGCTGTTAGAGCCAGGATTGCTTGAGCTCGACCCAGAATCATCAGAGTGGGAAGAGTTCTTGCTGGGCGTGAAAGTGGGCTTGCTTTGCACAGCACCAGACCCTCTTGATCGGCCAACCATGTCTGACATCGTGTTCATGCTCGAAGGATGTCGTGTTGGGCCCGACATTCCATCCTCCGCCGATCCCACCTCTCAACCTTCTCCGGCATAA 3399 0.4746 MVMPPPLLLLLVLCAPLLSCATRSAVTIAEIGALTAFKLNLHDPLGAFSAWDPSTPAAPCDWRGVSCNNNRVTELRLPRLQLSGRLTDRLSDLRMLRKLSLRSNSFNGTIPSSLSKCAFLRAVFLQYNSLSGNLPPEIGNLTGLQILNVAQNHLSGSIPGDLPLSLKYVDLSSNSFSGEIPSTIANLSQLQLINLSYNQFSGEIPASFGELQLLQYLWLDHNLLGGTLPSALANCSSLVHLSVEGNALGGVIPSAIAALPKLQVISLSQNNLTGSIPASIICNISFYMPSLRIVQLGFNGFTDIVWPEASTCFSVVQVLDIQHNNIHGRFPLWITTVPTLTMLDVSSNALSGDLPPDIGNLTKLEELKMANNSFTGMIPAEIKKCGFLRVVDFEGNRFAGEVPSFFGYMTGLKVLSLGGNLFSGSVPGSFGNLLALETLSLRGNSLNGTMPEELIGLSNLTTLDLGGNKFTGQISASIGNLSRLMVLNLSGNGFSGKIPGSLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENKLSGDVPEGFSSLTSLRHVNLSSNAFYGHIPENYGFLRSLVVLSLSDNHITGIIPPEIGNCSDIEILELGSNSLTGHIPIDLSRLSHLKVLDVSRNNLTGDMPGDISKCSSLTALFVDHNRLTGTIPESLSDLSNLTMLDLSANNLSGEISSNISMIPGLVYFNVSGNNLEGEIPPMLGSRFNNPSAFADNQNLCGKPLDKKCEDMVAKDNKRLIVLIIVIVVGACLLALCCCFYIFSLLRWRKRLKEGSSGEKKRSSPARASSGASGGRGSTDNGGPKLVMFNTKITLAETVEATRQFDEENVLSRTRYGLVFKACYGDGMVLSIRRLPDGSLDENMFRKEAESLGKVRHRNLTVLRGYYAGPPDLRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSTVHGDVKPQNVLFDADFEAHLSDFGLDRLTVATPGEPSTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1364 1132 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 20 551 - -
Glsi05g1364 1132 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Glsi05g1364 1132 SUPERFAMILY L domain-like 487 738 - -
Glsi05g1364 1132 Gene3D Transferase(Phosphotransferase) domain 1 915 1118 - -
Glsi05g1364 1132 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 523 618 - -
Glsi05g1364 1132 FunFam Nuclear pore complex protein NUP107 27 163 - -
Glsi05g1364 1132 SUPERFAMILY Protein kinase-like (PK-like) 819 1120 IPR011009 -
Glsi05g1364 1132 Gene3D Ribonuclease Inhibitor 29 162 IPR032675 -
Glsi05g1364 1132 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 915 1118 - -
Glsi05g1364 1132 SMART serkin_6 839 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1364 1132 FunFam Uncharacterized protein 259 475 - -
Glsi05g1364 1132 MobiDBLite consensus disorder prediction 790 818 - -
Glsi05g1364 1132 Gene3D Ribonuclease Inhibitor 456 746 IPR032675 -
Glsi05g1364 1132 SMART LRR_sd22_2 457 483 - -
Glsi05g1364 1132 SMART LRR_sd22_2 433 456 - -
Glsi05g1364 1132 SMART LRR_sd22_2 259 286 - -
Glsi05g1364 1132 SMART LRR_sd22_2 673 696 - -
Glsi05g1364 1132 SMART LRR_sd22_2 625 654 - -
Glsi05g1364 1132 SMART LRR_typ_2 529 552 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 337 361 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 288 312 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 625 649 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 457 481 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 553 575 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 93 117 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 577 601 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 673 697 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 409 432 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 211 235 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 433 456 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 187 210 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 141 165 IPR003591 -
Glsi05g1364 1132 SMART LRR_typ_2 259 283 IPR003591 -
Glsi05g1364 1132 MobiDBLite consensus disorder prediction 796 811 - -
Glsi05g1364 1132 FunFam Probable LRR receptor-like serine/threonine-protein kinase At4g36180 164 253 - -
Glsi05g1364 1132 Pfam Protein kinase domain 849 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1364 1132 SUPERFAMILY L domain-like 33 333 - -
Glsi05g1364 1132 Gene3D Phosphorylase Kinase; domain 1 815 914 - -
Glsi05g1364 1132 Pfam Leucine rich repeat 651 710 IPR001611 GO:0005515
Glsi05g1364 1132 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Glsi05g1364 1132 Pfam Leucine rich repeat 527 565 IPR001611 GO:0005515
Glsi05g1364 1132 Pfam Leucine rich repeat 578 638 IPR001611 GO:0005515
Glsi05g1364 1132 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Glsi05g1364 1132 Pfam Leucine rich repeat 316 373 IPR001611 GO:0005515
Glsi05g1364 1132 ProSiteProfiles Protein kinase domain profile. 839 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1364 1132 FunFam Putative LRR receptor-like serine/threonine-protein kinase 802 914 - -
Glsi05g1364 1132 SUPERFAMILY L domain-like 316 571 - -
Glsi05g1364 1132 Gene3D Ribonuclease Inhibitor 163 454 IPR032675 -
Glsi05g1364 1132 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 619 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1364 Glsi-ChrGlsi05 62687056 62690454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1364 7 1132 Receptor kinase-like Gene Family AT4G36180 70.097 0.0 1535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Glsi05g1364 Pkinase 5.9e-34 CL0016