Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1326 ATGGCGGCGCCGCAAGTTGACGCAGAATATCTCCAGCAAATCGAGAAGGCTCGTCGCGACCTACGTGCTCTAATTTACAGGAAGCAATGCGCTCCTATCATGCTTCGTTTGGCGTGGCATGACGCCGGAACCTACGATGTTAACACGAAAACAGGAGGTACTAATGGTTCAATCAGAAATGAGTATGAGCTGAAACACACCGCAAACAATGGTCTGAAAATAGCCGTTGATTTTTGCGAAGAAGTCAAGGCTAAACATCCAAAAATCACTTATGCGGACCTTTACCAGCTTGCTGGTGTTGTGGCAGTAGAGATCACTGGGGGCCCAACAATAGACTTTATTCCAGGCAGAAAGGATTCATCGATATCTCCAGAAGAAGGGCGGCTTCCAGATGCCAAACAAGGTTCATCGCATTTAAGGGATGTCTTTTATCGGATGGGTCTTACTGATAAAGATATCGTGGCTCTCTCTGGAGGCCACACATTGGGTAAAGCACATCTGGAACGATCAGGCTTTGAAGGCCCATGGACAAGGGACTATATGAAGTTCGATAACTCGTATTTTAAGGAACTCCTGAGAAATGAATCGAATGACTTACTGAAGCTTCCCACAGACAATGCTCTAGTCGAGGATCCTCAGTTCCGCATATATGTTGAGATTTACGCAGAGGATGAGGATGCTTTTTTTGCAGATTATGCAGCTTCGCACAAGAAACTCTCAGAGTTAGGCTTCGATCCACCTTCCTCGGTTCTCATGTTTTGCATCAGGATGAGGATGCTTTTCTCGAAGATTATGCAGCGTCGCAGAAAGTCTCCGAGCTAG 822 0.4623 MAAPQVDAEYLQQIEKARRDLRALIYRKQCAPIMLRLAWHDAGTYDVNTKTGGTNGSIRNEYELKHTANNGLKIAVDFCEEVKAKHPKITYADLYQLAGVVAVEITGGPTIDFIPGRKDSSISPEEGRLPDAKQGSSHLRDVFYRMGLTDKDIVALSGGHTLGKAHLERSGFEGPWTRDYMKFDNSYFKELLRNESNDLLKLPTDNALVEDPQFRIYVEIYAEDEDAFFADYAASHKKLSELGFDPPSSVLMFCIRMRMLFSKIMQRRRKSPS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1326 273 SUPERFAMILY Heme-dependent peroxidases 9 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Glsi05g1326 273 FunFam L-ascorbate peroxidase, cytosolic 130 236 - -
Glsi05g1326 273 CDD ascorbate_peroxidase 3 247 - -
Glsi05g1326 273 FunFam Cytosolic ascorbate peroxidase 17 135 - -
Glsi05g1326 273 Gene3D - 17 243 - -
Glsi05g1326 273 Pfam Peroxidase 18 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Glsi05g1326 273 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 246 IPR044831 GO:0004601|GO:0034599
Glsi05g1326 273 Gene3D Peroxidase, domain 2 130 236 - -
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 ProSiteProfiles Plant heme peroxidase family profile. 31 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1326 273 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1326 Glsi-ChrGlsi05 62417911 62420162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1326 89 243 Peroxidase AT4G17690 32.292 3.81e-19 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1326 05 62417911 62420162 Glsi05g1326 05 62417911 62420162 ECH