Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1325 ATGATCATCTATGCAGATCATTTTTCTCCTGCTCCGCAATTTTTGCTTCCTTGCATAGTGACTTGTGTTTCAACCTTATCGTCCTTCTCTGTACAGAGCAATTGTCATAAACTAAAGGCTAAAGCTGAGGAGGACAATGATAATTTGATTTTGTTAACCTTTGAAAAATCTTTAACTTCTTTAACACCTGGCTTATGGAATGACGCTGCAACCTACGATCTTAAGACGAAAACAGGAGGTGCTAATGGTTCAATCAGAAATAAGCAAGAGTTGGATCATGACTTGAAAACAGCCGTAGACATCTGCCAAGAAGTGAAGGAGAAGCATCCAAAAATTACATATGCGGACCTCTACCAGCTTGCTGGTGTTGTTGCAGTAGAGATCATTGGGGGCCCCACAGTTGACTTCATCCCAGGCAGAAAGGATTCAGTGAAATCTCCAGAAGAAGGGCGGCTTCCAGATGTCAATCAAGATGCATTGCATTTAAGAGATGTCTATAGTATTATGGGCCTTACTTATAAAGACATCGTGGCTCTGTCTGGAGTTCGCAACACATTGCTGGTTAAGGAGCATGAAGAACGCTCAGGCACTGAAGGCCAATCGACAAGGGACCATTTGAAGTTTTCTAACTCGTATTTTAAGGAACTACTGAAAAAAGAGCCAAATGACTTATTGAAAGTTCCCTCAAACAAGGCTCTAGTGGAGGATCCTCAGTTCCGCAAGTATGTTGACCTTTACGCAAAGGACGAGGATACTTTTTTTGCAGATTATGCGGCTTCGCACAAGAAACTCTCAGAGCTCGGCTTCAATCCACCTTCCTTGGATTCCAAGACTCCTGCTGCAAGGAATCGTGCCATATTGACCCAAGGTGCTATAGGAATTGCTGTTGCCACAACTGCGGTGATCCTGGGTTTCTTGTTCAATAAACGCCAGAGGTTGGAACCTCTAACAGCAACCAGCTTCAGCAGCTTTAAAGAAGTAGTCGTCAAGCTCCTTTACAACCTCAACCAGATCTCAGGTGTTACTCGACCCTACCATTGCTCTGAATATAAACATAACAATAGGCGCTGCATAAAAAGCATGCCTTGCTGGCACAAACTGCTTCATATATCACTTCCTCGCCTAGCACAGTGA 1134 0.4347 MIIYADHFSPAPQFLLPCIVTCVSTLSSFSVQSNCHKLKAKAEEDNDNLILLTFEKSLTSLTPGLWNDAATYDLKTKTGGANGSIRNKQELDHDLKTAVDICQEVKEKHPKITYADLYQLAGVVAVEIIGGPTVDFIPGRKDSVKSPEEGRLPDVNQDALHLRDVYSIMGLTYKDIVALSGVRNTLLVKEHEERSGTEGQSTRDHLKFSNSYFKELLKKEPNDLLKVPSNKALVEDPQFRKYVDLYAKDEDTFFADYAASHKKLSELGFNPPSLDSKTPAARNRAILTQGAIGIAVATTAVILGFLFNKRQRLEPLTATSFSSFKEVVVKLLYNLNQISGVTRPYHCSEYKHNNRRCIKSMPCWHKLLHISLPRLAQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1325 377 PRINTS Plant ascorbate peroxidase signature 111 129 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Plant ascorbate peroxidase signature 245 269 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Plant ascorbate peroxidase signature 76 86 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Plant ascorbate peroxidase signature 58 73 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Plant ascorbate peroxidase signature 193 217 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Plant ascorbate peroxidase signature 130 142 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Plant ascorbate peroxidase signature 151 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 ProSiteProfiles Plant heme peroxidase family profile. 47 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 Pfam Peroxidase 65 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1325 377 Gene3D Peroxidase, domain 2 153 261 - -
Glsi05g1325 377 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 61 275 IPR044831 GO:0004601|GO:0034599
Glsi05g1325 377 Gene3D - 66 268 - -
Glsi05g1325 377 SUPERFAMILY Heme-dependent peroxidases 9 273 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1325 Glsi-ChrGlsi05 62410676 62415961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1325 87 268 Peroxidase AT4G17690 28.000 1.18e-12 66.2