Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1313 ATGTTATCATCGGCAAACGGTGGTGAAAAATGCAACTGCAGCAAGAAGCTGAGACTCAATAGAGCACTGTCGTCAACTTCTTCTTCTTCTCCCTCTCCATTCTTTCCTTCACGTCTCCATCATCAAATCCCAAGTAATAGCACCAAAACCATGGAAGAGGTCTGGAAAGACATCAATCTAGCTTCGCTGAATGAGTACCATAGCACCAACCCCATCACTACCACCAACTCCAACTTTCGCAGTCCCTTGATGTTCCAAGACTTTCTAGGCCGACCATACACCATAGACGACCTACCAACCAGTGAGACTGCATCGTCTCTATACGGCCCGGGCTCGCCTCTCGTCACTGCTTTGAGCTTGAGTTCGCGTTCTGAGTTTCATCTCGACCCTCTTAAACGCAGGGACTCCCGATCACTACAGCCCCACCACCCTGTTTCTTCAAATAATGTTTATCCTTTCAGTACCCCATTTGAGAGCCTGGCTTGCGCTTCGGGTTCTCCTTGTCTTGGGAACAAGAGACTCGCTGAATCTGATCATAGCAGCTCAGGGGACGTGCGACATAAGCGTATGATAAAGAATCGGGAATCTGCGGCACGATCAAGAGCTAGAAAGCAGGAAAAGACTGCTTCTTTTTCACCCAAATCGAAAGATGGATGTGTAATGCCTCAGCCGCTCATAAAAGGAAGAACCCTCTGTATCGGACATATACTGCTCCATTTTGAGAAGCTTTGGTGCCTTCCTTTGTCCTTGTCTACTCCATTGCCTCTAAAACATATATACCCTTTGGAGTATATGATGGAACGGATTCGGTTTTAA 816 0.4706 MLSSANGGEKCNCSKKLRLNRALSSTSSSSPSPFFPSRLHHQIPSNSTKTMEEVWKDINLASLNEYHSTNPITTTNSNFRSPLMFQDFLGRPYTIDDLPTSETASSLYGPGSPLVTALSLSSRSEFHLDPLKRRDSRSLQPHHPVSSNNVYPFSTPFESLACASGSPCLGNKRLAESDHSSSGDVRHKRMIKNRESAARSRARKQEKTASFSPKSKDGCVMPQPLIKGRTLCIGHILLHFEKLWCLPLSLSTPLPLKHIYPLEYMMERIRF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1313 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Glsi05g1313 271 MobiDBLite consensus disorder prediction 24 47 - -
Glsi05g1313 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 44 210 IPR043452 GO:0003700|GO:0045893
Glsi05g1313 271 MobiDBLite consensus disorder prediction 177 211 - -
Glsi05g1313 271 CDD bZIP_plant_BZIP46 186 211 - -
Glsi05g1313 271 Gene3D - 186 214 - -
Glsi05g1313 271 SUPERFAMILY Leucine zipper domain 186 215 IPR046347 GO:0003700|GO:0006355
Glsi05g1313 271 Pfam Basic region leucine zipper 186 210 IPR004827 GO:0003700|GO:0006355
Glsi05g1313 271 MobiDBLite consensus disorder prediction 173 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1313 Glsi-ChrGlsi05 62343931 62344974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1313 50 206 bZIP Transcription Factor Family AT4G35900 43.169 4.16e-25 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi05g1313 None None None