Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1309 ATGGCTGGCATGAAACCTCTTCTTGTCCTTTCAATAGGGTCGTTATTGGCAGTAGCCACCACCGTCATAGGCCACAAGATTCAAACCGGCCCCTGCGATGTTGTTGGCCTTCTCGGCATCGCCTGGTCCTTTTACGGCATGATCTTCGTTCTTGTCCACTGCACTGCTGGAATTTCAGGTTTTGCGGTGCTTATGGTGCACTTGGCTACAATTCCTATAACTGGTAATGGCGTCAACCCTGCTGGGAGTTTTGGTGCTGCACTTGTCTACAACAGTGGCAAAGTCTGGCATGATCAGTGGATATTCTGGGTTGGACCCTTGCTTGGGGCAATGCTTGCGGCAGCATACCACCAATGCATTATGAGAGCAGGAGATTTCAAGGCTTTGGGATCGTTCCGTAGCCATCGCACAACCTAA 417 0.506 MAGMKPLLVLSIGSLLAVATTVIGHKIQTGPCDVVGLLGIAWSFYGMIFVLVHCTAGISGFAVLMVHLATIPITGNGVNPAGSFGAALVYNSGKVWHDQWIFWVGPLLGAMLAAAYHQCIMRAGDFKALGSFRSHRTT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1309 138 PRINTS Major intrinsic protein family signature 60 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi05g1309 138 PRINTS Major intrinsic protein family signature 100 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi05g1309 138 Pfam Major intrinsic protein 60 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi05g1309 138 SUPERFAMILY Aquaporin-like 60 122 IPR023271 -
Glsi05g1309 138 Gene3D Glycerol uptake facilitator protein. 58 138 IPR023271 -
Glsi05g1309 138 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 60 125 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1309 Glsi-ChrGlsi05 62311090 62315138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1309 15 60 Major Intrinsic Protein MIP AT4G35100 78.261 4.53e-17 73.6