Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1302 ATGTTATCAAGGTTGATGGACTTTCTGAGCGCCTGTTGGCGACCATCCTCAGACCAATATGTCCACAAAGGTTCAGATGTGGCTGGCCGGCAGGATGGATTACTTTGGTACAAGGACGCTGGCCAGCACTTAATTGGTGATTTCTCAATGGCTGTTGTACAGGCCAACAATTTGCTTGAGGATCAAAGCCAAATAGAATCTGGTCCCCTTAGCTTGCTTGAGACTGGCCCTTATGGTACCTTTATTGGAGTATATGATGGTCACGGCGGACCTGAAACATCACGTTACATCTGTGATAATCTCTTCCAACATTTAAAACGGTTTACCTCTGAGCAACAGTCCATGTCAGTGGATGTAATACAGAAAGCATACCAAGCGACGGAAGAAGGTTTTGTATCTCTAGTCACTAAACGTTGGCCTATTAATCCCCAAATTGCTGTTGTGGGATCATGCTGTCTGGTTGGTGTAATTTGTGGTGGTACACTCTACATTGCTAACCTTGGTGATTCCCGAGCTGTGCTTGGGCGGGTTGTCAGAGCAACTGGGGAGGTTCTGGCAATTCCACTGTCCTCTGAGCATAATGTGGGCATAGAATCTGTAAGACAAGAGATGCATTCTTTGCATCCAGATGACTCGCAAATCGTGGTTTTAAAGCATAATGTGTGGCGCGTGAAGGGTCTGATACAGGTTTCTAGATCCATTGGTGATTTATACCTTAAAAAGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTCCGCGAACCTTTTAAAAGACCAATTTTGAGCTCTGAGCCATCGATTTCTGTTCATGAACTTCAGCAGCAAGATCAGTTTCTCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAATCAGGATGCAGTTGATATAGTTCAAAATCACCCACGCAGTGGAAGTGCTCGGAGACTTGTGAAAGCTGCATTGCACGAAGCAGCAAAAAAGAGAGAGATGAGATACTCTGATTTGAAGAAAATAGATCGTGGTGTCCGCCGTCATTTCCACGATGACATTACAGTAGTGGTTGTATTTCTTGACTCCAATCTTGTTAGCAGAGCTAGCTCAGTAAGAGGTCCTCCTTTATCAGTGAGAGGAGGTGGTGTTAACCTACGCGCTAAAACTCTGGCTCCTTGTGCTACACCTTTGGAACTTGGTTCTGGCTGA 1194 0.4497 MLSRLMDFLSACWRPSSDQYVHKGSDVAGRQDGLLWYKDAGQHLIGDFSMAVVQANNLLEDQSQIESGPLSLLETGPYGTFIGVYDGHGGPETSRYICDNLFQHLKRFTSEQQSMSVDVIQKAYQATEEGFVSLVTKRWPINPQIAVVGSCCLVGVICGGTLYIANLGDSRAVLGRVVRATGEVLAIPLSSEHNVGIESVRQEMHSLHPDDSQIVVLKHNVWRVKGLIQVSRSIGDLYLKKAEFNKEPLYAKFRLREPFKRPILSSEPSISVHELQQQDQFLIFASDGLWEHLSNQDAVDIVQNHPRSGSARRLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSVRGPPLSVRGGGVNLRAKTLAPCATPLELGSG 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1302 397 CDD PP2Cc 48 355 IPR001932 -
Glsi05g1302 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Glsi05g1302 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Glsi05g1302 397 PANTHER PROTEIN PHOSPHATASE 45 353 IPR015655 GO:0004722|GO:0006470
Glsi05g1302 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Glsi05g1302 397 FunFam Phosphatase 2C family protein 36 365 - -
Glsi05g1302 397 Pfam Protein phosphatase 2C 80 325 IPR001932 -
Glsi05g1302 397 SMART PP2C_4 41 353 IPR001932 -
Glsi05g1302 397 Gene3D - 34 365 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1302 Glsi-ChrGlsi05 62283212 62287278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1302 1 383 PP2C-type Phosphatase Gene Family AT3G51370 77.807 0.0 623