Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1290 ATGGCTGACAATGGTTCTAGTAAGGGGGTCGTCTATCTTCACGGCGACTTGGACTTGAAAATCGTAGAGGCTCGAAGGTTGCCCAACATGGATGTTGTCTCCGAGAATTTTCGCCGTTGTATCACTGGCTGTGACACTATTAAATTTAATTCTTCCGATTCCGCCGCCTCAGCCGACAGAACCAACCGCAAAATCCACCACCGTAAGAAGATTATCACCAGCGACCCTTACGTGACGGTTACCGTGCCACAAGCTACTGTTGCCCGCACACGTGTGATAAAGAATTCACAAAACCCTTTCTGGGACGAGCGCTTCAACATCCCCTTGGCTCACCCCGTCGTTAATTTGGAATTTCGTGTGAAAGATGATGATATCTTCGGTGCTGAGCTTATGGGAACTGTTAAAATTCCTGCAGAGAGGGTTGCCTCCGGTGAGTTTATTAGCGACTGGTTCCCAATTCTGGGATCCTCCGGTAAGCCCCCCAAGCTTGACACCGCACTTTATATTGAAATGAAGTTCACACCAGTTGGCGAGAACCCTCTTTATCGGCACGGCATTGCGGCCGATCCTGAGCACAAGGGTGTGAGGGACACGTATTTTCCAGTGCGGAAAGGAAGCTCCGTGAGACTGTACCAAGATGCCCATGTTCCTGAAGGGATACTACCTGAGATTAAGCTGGAGGAAGGGAAGGTTTTTAGGCACGAAAAATGTTGGGAAGATATTTGTCATGCTATATCTGAAGCTCATCATATGGTTTATCTCGTGGGTTGGTCAATCTACCACAAGGTGAAGCTTATTAGGGAGCCAACCAGGCAATTGCCACGAGGTGGAGATTTAAATCTTGGTGAATTGCTCAAGTACAAGTCTCAAGAAGGGGTGCGAGTTCTGTTACTGATTTGGGATGATAAAACTTCCCACGATAAGTTGCTCTTCAAGTCGTCTGGAGTAATGCAGACACACGATGAAGAAACCAGAAAGTTCTTTAAACATTCTTCGGTTATGTGTGTGTTAGCACCTCGGTATGCTAGCAACAAGATGGGCTATCTAAAGCAAAAGGTTGTTGGGAATGTCTTCACACACCACCAAAAATGTGTTATTGTGGATACACAGGCTTCTGGTAATAACCGGAAGATAAGTGCTTTTTTAGGAGGACTTGATATATGTGATGGTCGCTATGATACACCTGAGCATCGACTTTTTCGTGATCTTGATACTGTATTCTCGGGTGACTTTCACAATCCTACAGTTCCCGCTGGAACAAGGGCTCCAAGGGAACCATGGCATGATATGCACTGCAGAATAGATGGCCCTGCTGCATATGATGTTCTTATTAATTTTGAACAGCGATGGAGAAAAGCAACTAAGTGGAAAGAGTTTGCAATAATTTTCAAACAGGCTTCTCATTGGCATGATGATTCTTTACTAAAAATAGATCGCATATCCTGGATATTAAGTCCTTCCTTGTCACTCTCAAAGGATGGTACCACAATCGTTCCAGATGATGACCCTAAAGTATGGGTTTCTGAAGAAGACGATCCTGAAAACTGGCATGTTCAGATATTCCGCTCAATTGACTCAGGATCCCTGAAAGGGTTTCCCAAATATGTTGATGTTGCTCGGTCCCAGAATCTTATATGTGCTAAGAATTTGGTAATAGATAAAAGCATTCAAACAGCATACATCCAGGCAATCAGATCTGCTCAACACTTTATTTATATAGAAAACCAATATTTTATTGGATCATCATATGCATGGCCATCTTATAAAGATGCAGGAGCTGATAATCTCATCCCAATGGAATTGGCACTGAAAATTGCTAGTAAAATCAGAGCTAAGGAGAGATTTGCTGTGTATATCGTTGTACCAATGTGGCCAGAGGGTGATCCTAATTCTGGGCCGGTGCAGGAAATTCTCTTTTGGCAGGGCCAGACAATGCAAATAATGTATGATATTGTAGCTCGAGAATTGAAATCAATGCAACTTACTAACTTGCATCCACAAGACTACCTCAACTTCTATTGCCTTGGTAACCGGGAGGAAATTCATGAAGAGAACTTGAGCTTGAATGGTGCTCCAGTCTCCAGTGCATATAAGTATGGTCGATTTATGATTTATGTGCATGCTAAGGGGATGATTGTTGATGATGAGTATGTGATAGTGGGATCTGCTAATATAAATCAAAGATCTATGGCCGGTACAAAAGATACAGAGATAGCTATGGGCTCATATCAACCTCATCACACTTGGAGGGTGAAGAAAGGACATCCATATGGTCAGATTTATGGTTATAGAATGTCACTGTGGAGAGAGCATCTTGGGAAGATAGAAGCAAGTTTTGAAGAACCAGAGAGTTTGGAATGTGTCCGTGAAGTGAATGCAGTTGCTAACGATAATTGGAGAAAATTCACTTCTGAGAACTTCTCACTGCTGCAGGGGCATATGCTTAGGTATCCTGTACATGTAGATGCTGATGGAAAGGTAAGCCCCCTTCCTGGATATGAGAACTTCCCGGACGCTGGAGGTAAAGTACTGGGGACTCATTCACCAACAATTCCAGATATCCTAACAACATAA 2574 0.4347 MADNGSSKGVVYLHGDLDLKIVEARRLPNMDVVSENFRRCITGCDTIKFNSSDSAASADRTNRKIHHRKKIITSDPYVTVTVPQATVARTRVIKNSQNPFWDERFNIPLAHPVVNLEFRVKDDDIFGAELMGTVKIPAERVASGEFISDWFPILGSSGKPPKLDTALYIEMKFTPVGENPLYRHGIAADPEHKGVRDTYFPVRKGSSVRLYQDAHVPEGILPEIKLEEGKVFRHEKCWEDICHAISEAHHMVYLVGWSIYHKVKLIREPTRQLPRGGDLNLGELLKYKSQEGVRVLLLIWDDKTSHDKLLFKSSGVMQTHDEETRKFFKHSSVMCVLAPRYASNKMGYLKQKVVGNVFTHHQKCVIVDTQASGNNRKISAFLGGLDICDGRYDTPEHRLFRDLDTVFSGDFHNPTVPAGTRAPREPWHDMHCRIDGPAAYDVLINFEQRWRKATKWKEFAIIFKQASHWHDDSLLKIDRISWILSPSLSLSKDGTTIVPDDDPKVWVSEEDDPENWHVQIFRSIDSGSLKGFPKYVDVARSQNLICAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYIVVPMWPEGDPNSGPVQEILFWQGQTMQIMYDIVARELKSMQLTNLHPQDYLNFYCLGNREEIHEENLSLNGAPVSSAYKYGRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGSYQPHHTWRVKKGHPYGQIYGYRMSLWREHLGKIEASFEEPESLECVREVNAVANDNWRKFTSENFSLLQGHMLRYPVHVDADGKVSPLPGYENFPDAGGKVLGTHSPTIPDILTT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1290 857 Gene3D Endonuclease Chain A 226 474 - -
Glsi05g1290 857 SMART pld_4 356 391 IPR001736 GO:0003824
Glsi05g1290 857 SMART pld_4 702 729 IPR001736 GO:0003824
Glsi05g1290 857 Gene3D Endonuclease Chain A 529 753 - -
Glsi05g1290 857 Pfam Phospholipase D Active site motif 356 391 IPR001736 GO:0003824
Glsi05g1290 857 Pfam C2 domain 15 153 IPR000008 -
Glsi05g1290 857 Gene3D C2 domain 14 180 IPR035892 -
Glsi05g1290 857 PIRSF PLD_plant 1 857 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Glsi05g1290 857 PANTHER PHOSPHOLIPASE D 7 845 IPR015679 -
Glsi05g1290 857 SUPERFAMILY Phospholipase D/nuclease 199 464 - -
Glsi05g1290 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 176 IPR035892 -
Glsi05g1290 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824
Glsi05g1290 857 Pfam PLD-like domain 561 738 IPR025202 -
Glsi05g1290 857 FunFam Phospholipase D delta 228 472 - -
Glsi05g1290 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 356 391 IPR001736 GO:0003824
Glsi05g1290 857 Pfam Phospholipase D C terminal 777 846 IPR024632 -
Glsi05g1290 857 SUPERFAMILY Phospholipase D/nuclease 553 787 - -
Glsi05g1290 857 SMART C2_3c 16 150 IPR000008 -
Glsi05g1290 857 CDD C2_plant_PLD 9 174 - -
Glsi05g1290 857 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1290 Glsi-ChrGlsi05 62213903 62220187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1290 7 693 Phospholipase D Gene Family (Wang group) AT4G35790 70.767 0.0 1057