Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1284 ATGGCGATCGAGGAAGACATTGAGAGCTGTGGAAGCAGAGCTTTTGTACAGTCACAGCAAGCTCATCCTCGTCAACACAGGCAGAAATTGGAGGTGTACAATGAGGTGCTTCGTCGAATTCAAGAATCGAATTGTGAGGAGGCTAATGTTCCAGGGTTTGATGACCAGCTATGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCATTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTACACATAAGAGATTGCTGAAGTTGGCAGAGGACTCTGCTAATCGACCTGCATTTCAAGTTCGCTCAGTACAGGTATATCCTTATGGATGTGCAAATTTTGTTGACTCAATGCTTTCAGATCCTTCTGAGAAAGAAGATGCACAGAGTTCATTTAACTATTCCTCTAAGCAGGGAATTCATCCTCCACCTACTTTTGGTTCATCCTCTAATCTTGATCCTCTTGCTCTTCAAGCGAGTAAAAATAATATTGGAGATGGGGACAGTGATATGGATGTGAGACCATGCTTTTACCGGCCCATGCACGAGATTACCTTCTCAACAGTTGACAAGCCTAAAGTCCTTAGTCAGTTGACTTCATTACTTGGTGAGATGGGATTAAACATTCAAGAAGCTCATGCATTTTCCACCATCGATGGGTTTTCTCTGGATGTCTTTGTTGTTGAGGGTTGGCCTAATGAGGAAACTGAGGAGCTTAAAGGTGTGTTGGAAAAGGAAATTTTGAAGTTTAAGGAGCAATATCTGTCAAAACAGGGCATATCTTCCACGGCTAAGGTACATCACCAGGCAAAGATGGAATCCTTCCCTCATTGTGTAGAAATACCATCTGATGGAACAGATGTCTGGGAAATTGATACCAACCAGCTGAAATTTGAGAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGTACATATTGTAGTCAGGATGTAGCTATCAAAATCCTCAAGCCTGAGCGCATAAATACAGAGATGTTGAGAGAGTTTGCCCAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTACAGTTCATTGGTGCATGTACTCAGCCGCCAAATCTGTGTATTGTTACCGAGTTTATGTCTAGAGGAAGCGTATATGAATTTCTGCACAAACAAAGGGGAGTATTTAAGCTTCCATCTTTACTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTACAAAGTCAATCTGGAGTGATGACTGCTGAAACTGGAACTTACCGCTGGATGGCTCCAGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACGGGAGAACTGCCTTACTCTTACTTGACCCCATTGCAAGCGGCTGTAGGCGTGGTGCAGAAGGGTCTACGACCTTCAATCCCAAAGCATGCACACCCAAGACTTTCCGAACTGCTCCAGCGGTGCTGGCAACAAGATCCAATTGAGAGACCAAATTTCTCTGAAATACTAGAAATTCTTCAGCAGATAGCAAAGGAGGCTACGGATGATCGACCCAAAGATAAATTATCCCATGGCTTTCTCTCGGCATTTAGACGGGCCCACCACTAA 1725 0.4325 MAIEEDIESCGSRAFVQSQQAHPRQHRQKLEVYNEVLRRIQESNCEEANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLTHKRLLKLAEDSANRPAFQVRSVQVYPYGCANFVDSMLSDPSEKEDAQSSFNYSSKQGIHPPPTFGSSSNLDPLALQASKNNIGDGDSDMDVRPCFYRPMHEITFSTVDKPKVLSQLTSLLGEMGLNIQEAHAFSTIDGFSLDVFVVEGWPNEETEELKGVLEKEILKFKEQYLSKQGISSTAKVHHQAKMESFPHCVEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGTYCSQDVAIKILKPERINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYEFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQSQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLTPLQAAVGVVQKGLRPSIPKHAHPRLSELLQRCWQQDPIERPNFSEILEILQQIAKEATDDRPKDKLSHGFLSAFRRAHH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1284 574 CDD ACT_TyrKc 181 248 - -
Glsi05g1284 574 SUPERFAMILY Protein kinase-like (PK-like) 274 545 IPR011009 -
Glsi05g1284 574 MobiDBLite consensus disorder prediction 124 152 - -
Glsi05g1284 574 Gene3D Transferase(Phosphotransferase) domain 1 375 564 - -
Glsi05g1284 574 CDD STKc_MAP3K-like 302 545 - -
Glsi05g1284 574 MobiDBLite consensus disorder prediction 121 152 - -
Glsi05g1284 574 FunFam Serine/threonine-protein kinase isoform 1 286 374 - -
Glsi05g1284 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Glsi05g1284 574 Coils Coil 233 253 - -
Glsi05g1284 574 SMART serkin_6 296 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1284 574 Pfam Protein tyrosine and serine/threonine kinase 296 545 IPR001245 GO:0004672|GO:0006468
Glsi05g1284 574 ProSitePatterns Protein kinases ATP-binding region signature. 302 323 IPR017441 GO:0005524
Glsi05g1284 574 FunFam serine/threonine-protein kinase HT1 375 565 - -
Glsi05g1284 574 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Glsi05g1284 574 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Glsi05g1284 574 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Glsi05g1284 574 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Glsi05g1284 574 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Glsi05g1284 574 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 150 552 - -
Glsi05g1284 574 ProSiteProfiles Protein kinase domain profile. 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1284 574 ProSiteProfiles ACT domain profile. 183 262 IPR002912 -
Glsi05g1284 574 Gene3D Phosphorylase Kinase; domain 1 285 374 - -
Glsi05g1284 574 SUPERFAMILY ACT-like 181 246 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1284 Glsi-ChrGlsi05 62175424 62190212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1284 1 573 MAP Kinase Kinase Kinase AT4G35780 72.049 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi05g1284 PK_Tyr_Ser-Thr 5.4e-75 CL0016