Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1251 ATGACATTGCCAACAATATTACCGTTGTCAAGACAAACGTCGAAGGATCAATTTGGCTCTTGGGTTTTCTGGGTGCGATTGTTCAGTTTATCAACCAAAATGGTCATCTCTGATCAGAACAATCCTAGCTTAATCAAACCCACAAATTTTCAAGGAGGGTTAGAAACAGGCACCAGAAAATTTGGGCACAACAGAAGAGCGTTAAGCGTCATTAATCAGAATCTAGTGCAGGGTCGACCGTACCCTTGCGTCGTTAATAAGAGGGGGTTGCCAGATAAACATGAGATTTGTGAAAAGAAGCAGGCGGATCCAGTGCATCGACCGATCACCAGGAGGTTTGCTGCACAGATTGCTAGCACACAGCAATCTCGCGCTGAGGAAACTAAGACGTCAAACACCTCAATCTTAAGCTGCAATGACTTTAGAGACGCTATATTCATTGATGATGAACAAAAATCACCGGCAGATCAGCCAGTGCCAATGTCATTAGAGCAAATAGAATCAGTTCATAGCAAACTGGAACAGATGGAGGAAGTTGAGATGGAGGACATAGCTGAAGAGCCTATTGTGGACATTGATACCGGTGATGCCAAGAATCCTCTTGCAGCGGTAGATTATATTGAAGAACTTTATGACTACTACAGAAAAATGGAGAGTTTGAGCTGTGTCTCACCGGATTATATGGCACAACAAGATGATATTAATGAAAGGATGAGGGCTATACTGATTGACTGGCTTGTTGAGGTGCACGACAAATTTGACCTCATGCAAGAGACGTTGTTTCTTACTGTTAATCTCATAGATAGATTTTTGGCAAAGCAGAACATGGTAAGAAAGAAACTTCAGTTGGTGGGTCTGGTTGCCATGCTTTTGGCATGCAAGTATGAAGAAGTTTCTGTACCTGTAGTCGGGGATCTGATCCTTATATCAGACAGAGCATACACAAGGAAGGAAGTTCTGGACATGGAGAGTTTGGTGCTCAATACATTGCAGTTTAACATGTCAGTGCCAACACCATATGTTTTCATGAGAAGGTTCCTAAAGGCGGCTGAAGCAGACAAGAAACTTGAGCTTCTAGCTTTCTTCTTGATAGAGCTGTCTCTCGTGGAATATGAGATGATGAAGTTCCCGCCATCTTTGCTAGCCGCAGCTGCAGTCTATGCAGCTCAGTGTACTACTTTTGGTTTCAAACAGTGGAATAAGACATGTGAATGGCATACAATCTACACAGAAGATCAGCTAATAGAATGCTCAAGTTTGATGGTAGGATTCCACCAGAAGGCTGGGACAGGGAAACTTACAGGGGTATATAGGAAGTACTGCTCATCTAAATATAGCTACATTGCAAAATGTGAACCAGCATGTTTTCTTCGGAAGAACCAATTGTAG 1389 0.4262 MTLPTILPLSRQTSKDQFGSWVFWVRLFSLSTKMVISDQNNPSLIKPTNFQGGLETGTRKFGHNRRALSVINQNLVQGRPYPCVVNKRGLPDKHEICEKKQADPVHRPITRRFAAQIASTQQSRAEETKTSNTSILSCNDFRDAIFIDDEQKSPADQPVPMSLEQIESVHSKLEQMEEVEMEDIAEEPIVDIDTGDAKNPLAAVDYIEELYDYYRKMESLSCVSPDYMAQQDDINERMRAILIDWLVEVHDKFDLMQETLFLTVNLIDRFLAKQNMVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVLDMESLVLNTLQFNMSVPTPYVFMRRFLKAAEADKKLELLAFFLIELSLVEYEMMKFPPSLLAAAAVYAAQCTTFGFKQWNKTCEWHTIYTEDQLIECSSLMVGFHQKAGTGKLTGVYRKYCSSKYSYIAKCEPACFLRKNQL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1251 462 Gene3D - 223 335 - -
Glsi05g1251 462 SUPERFAMILY Cyclin-like 198 334 IPR036915 -
Glsi05g1251 462 SUPERFAMILY Cyclin-like 336 453 IPR036915 -
Glsi05g1251 462 PIRSF Cyclin_A_B_D_E 31 462 IPR046965 GO:0016538|GO:0044772
Glsi05g1251 462 FunFam G2/mitotic-specific cyclin 223 330 - -
Glsi05g1251 462 ProSitePatterns Cyclins signature. 239 270 IPR006671 -
Glsi05g1251 462 PANTHER CYCLINS 158 440 IPR039361 -
Glsi05g1251 462 FunFam G2/mitotic-specific cyclin-1 331 449 - -
Glsi05g1251 462 SMART cyclin_7 341 423 IPR013763 -
Glsi05g1251 462 SMART cyclin_7 244 328 IPR013763 -
Glsi05g1251 462 Pfam Cyclin, N-terminal domain 210 335 IPR006671 -
Glsi05g1251 462 Gene3D - 210 450 - -
Glsi05g1251 462 Pfam Cyclin, C-terminal domain 337 453 IPR004367 -
Glsi05g1251 462 CDD CYCLIN_AtCycB-like_rpt1 186 332 - -
Glsi05g1251 462 SMART Cyclin_C_2 337 454 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1251 Glsi-ChrGlsi05 61966512 61970084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1251 34 457 Core Cell Cycle Gene Families AT1G20610 57.639 1.00e-175 498