Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1245 ATGGAATACCTTGCACAGAATTCCCCCACCCAAAAGTCATCATCTTCTTCCTCTCAACGCCCTCGTTCGGGTACGGTCATGCGGACCCAATCCCCTGCTGGAGGCGGACACTATGGGGGGTCCGCTGAGAACTCGATCAAAAACCCAGTATTGCAGGTGGTGGAGGTTAGCAATGCCGCAGAAGGGCGTAGGTCCTCCTTTGCGGTGGCACTGGGTGTCGCGAAAGGTGGGTCGGGGTCGAGAGTGGAGAAGCCAAGGGTGCAGATGAGGGTGAAGGATCCGTGCAGGGCTGCAAAACAGAGCAACAAGCGGAAGCCATCTGATCTGACAAACCCTCCGTCTGGGATGCACACTTGTCGAATCTGCCAGAGAGAGTTCGCCAGCCAGATGGCTTTGAATGGCCATATGCGGGTTCACTCGGAACACAAGCACCATGGTATTTTAAGGCATCCTGTGATCTCCTCTAAATCTCCATCACCAGCACTACCAGCACCAGCACCAGAAGCAGTTAAACTTCAGGGTGATAGTGGAAGGGGGGTGGCTGCTGGACCAAGTGGGATCACATTCGATCTGAACCAGCCAATGGAAGGAGTGGAGTCTAATGCTGAAGAGAAAAGCGATGAAGGAAAAAAATTTGATTTTGACCTCAACGAGCCCTATGCTGAAGATGATGAAGACAAGCCCTAG 687 0.5298 MEYLAQNSPTQKSSSSSSQRPRSGTVMRTQSPAGGGHYGGSAENSIKNPVLQVVEVSNAAEGRRSSFAVALGVAKGGSGSRVEKPRVQMRVKDPCRAAKQSNKRKPSDLTNPPSGMHTCRICQREFASQMALNGHMRVHSEHKHHGILRHPVISSKSPSPALPAPAPEAVKLQGDSGRGVAAGPSGITFDLNQPMEGVESNAEEKSDEGKKFDFDLNEPYAEDDEDKP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1245 228 MobiDBLite consensus disorder prediction 154 228 - -
Glsi05g1245 228 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 65 224 IPR044653 GO:0003700
Glsi05g1245 228 SUPERFAMILY beta-beta-alpha zinc fingers 116 144 IPR036236 -
Glsi05g1245 228 ProSitePatterns Zinc finger C2H2 type domain signature. 119 139 IPR013087 -
Glsi05g1245 228 MobiDBLite consensus disorder prediction 200 217 - -
Glsi05g1245 228 SMART c2h2final6 117 139 IPR013087 -
Glsi05g1245 228 MobiDBLite consensus disorder prediction 1 44 - -
Glsi05g1245 228 ProSiteProfiles Zinc finger C2H2 type domain profile. 117 144 IPR013087 -
Glsi05g1245 228 MobiDBLite consensus disorder prediction 1 30 - -
Glsi05g1245 228 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1245 Glsi-ChrGlsi05 61919103 61919925 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi05g1245 None None None