Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1243 ATGCAAAACCTGGCACAGAGCTCCCCTACCCAAAAGTCATCATCTTCTTCCCCTCAACACCCTCCTTTGGGTACGTTCAGTCGGACCCAATCTACTGGTGGCTCTTCTCCCTCTGCTGGAGGCGGACACTCTGGGGGGTCCGCCGAGAACGTGATCATAACCCCATTATTACAGGTGGGGGAGGTTAGCAGTGCCGGAGAAGGGGGTGGGTCCTCCTTGGCGGTGGCTGTGGGTGCAGGGGAAGGTGGGTCCGGGTCGGGAGTGGAGAGGCCGGGGGTGGAGGATCTGAGCGAGGGTACAAAACGGAGCAACAAGCGGAAGCCATCTGAACTGATAGACCCTCCGCCTGGGACGCCCACTTGTCCTGTCTGCCAGAAAGAATTCACCAGCTGGAAGGCCGCGTTTGGTCACATGCGGGCTCACCCTGAACGCGTGTACCGTGGTTTTTTCAGGCCTCCTGTTTTCTCCTCAACATCTTCATCACCAGCACCACCAGCACCAGCACCAGCACCAGCACCACAAGCAGTTCAAGCTCAGGGTGATAGTGGAAGCGGGGAGGGTGGGTCATCATCATCGACTGCTGGACCAAGTGGGATTACATTCGATCTGAACCAACCAATGGAGGGAGTGGAGTCTAATGTTGCAGAGAAAACCGATGAAGGAAAACAATTTTATTTTGACCTGAACGAGCTCCCTGGTGAAGATGATGAAGACAAGCCCTAG 723 0.5588 MQNLAQSSPTQKSSSSSPQHPPLGTFSRTQSTGGSSPSAGGGHSGGSAENVIITPLLQVGEVSSAGEGGGSSLAVAVGAGEGGSGSGVERPGVEDLSEGTKRSNKRKPSELIDPPPGTPTCPVCQKEFTSWKAAFGHMRAHPERVYRGFFRPPVFSSTSSSPAPPAPAPAPAPQAVQAQGDSGSGEGGSSSSTAGPSGITFDLNQPMEGVESNVAEKTDEGKQFYFDLNELPGEDDEDKP 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1243 240 MobiDBLite consensus disorder prediction 158 172 - -
Glsi05g1243 240 ProSitePatterns Zinc finger C2H2 type domain signature. 121 141 IPR013087 -
Glsi05g1243 240 MobiDBLite consensus disorder prediction 177 200 - -
Glsi05g1243 240 MobiDBLite consensus disorder prediction 1 43 - -
Glsi05g1243 240 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 24 167 - -
Glsi05g1243 240 MobiDBLite consensus disorder prediction 94 109 - -
Glsi05g1243 240 MobiDBLite consensus disorder prediction 151 240 - -
Glsi05g1243 240 MobiDBLite consensus disorder prediction 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1243 Glsi-ChrGlsi05 61896777 61897633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1243 113 155 C2H2 Transcription Factor Family AT4G35280 51.163 1.57e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi05g1243 None None None