Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1237 ATGGGTCTTTGCTTTGGGTCTCTCGCTCAAGATGGACCAGAGTCTAGTGTCAATAGACATCCATATCCATATTCAGGTTCGGCAAGTACTGACAGTAAGAACGCTGGATTCTCTGCTACGAACAGCAGTGCTGGAAGGAGTCAGTTTTCGGAAATAGCAAGTGGGAGTCTTGCGGGGTCCCTTCCGTCTCCCAATGGGCAATTTTTAGAAACACCAAACTTGAAGGTCTTCAGTTTTGTGGATTTGAAAGCAGCCGCTAAGAACTTCAAATCGGATACATTGCTTGGGGAAGGTGGTTTTGGTAAAGTTTACAAAGGTTGGTTGGATGAGAAGACACTCACACCGGCTAAGGCGGGCTCCGGAATGATGGTCGCTATTAAAAAATTGAACGCAGAAAGTATGCAAGGCTTCCAAGAGTGGCAGTCAGAAGTCAATTTTTTAGGAAGGATTGCTCACCCCAACTTGGTCAAGCTATTGGGTTACTGTTGGGACGATGAGGAGCTTCTCCTTGTGTATGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTCTTTAGAAGAAATCCTAACATTGAACCACTTTCTTGGAAATTGCGACTTAAAATAGCTATTGGTGCAGCTCGGGGCCTGGCTTTCTTGCATACGTCAGAAAAGCAAGTGATATACAGAGATTTCAAGGCCTCGAATATACTACTTGATGTGAATTATAATGCAAAAATTTCTGATTTTGGCTTGGCTAAATTGGGGCCTTCTGGGGGAGAATCACATGTGACTACTAGGATCATGGGCACGTATGGCTATGCTGCTCCAGAATACATTGCAACTGGCCATTTGTATGTCAAGAGTGATGTGTATGGCTTTGGTGTAGTGCTGCTTGAAATGCTGACAGGCCTGCGGGCACTTGATACAAAGCGACCTAGTGGGCAACAGAATCTGGTTGAATGGTTGAAGCCATATCTCTCTAGTAGAAGAAAATTGAAAACCATTATGGATGCTAGAATTGAGGGCCAATATTCACTCAAGGCAGCATTACAAGCAGCGCAGCTTACTCTGAAATGCCTACAACCTGAACCTAAACAACGTCCTTCTATGAAAGATGTATTGGAGACACTAGAAGTCATTGAAGGTATCAAGGATAAAGTAAAGGAATCAAAGAATCGCCGTGCTCAATCTGCAGCTCTTGACCGTCCCCACTAG 1197 0.4436 MGLCFGSLAQDGPESSVNRHPYPYSGSASTDSKNAGFSATNSSAGRSQFSEIASGSLAGSLPSPNGQFLETPNLKVFSFVDLKAAAKNFKSDTLLGEGGFGKVYKGWLDEKTLTPAKAGSGMMVAIKKLNAESMQGFQEWQSEVNFLGRIAHPNLVKLLGYCWDDEELLLVYEFMPKGSLENHLFRRNPNIEPLSWKLRLKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDVNYNAKISDFGLAKLGPSGGESHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPSGQQNLVEWLKPYLSSRRKLKTIMDARIEGQYSLKAALQAAQLTLKCLQPEPKQRPSMKDVLETLEVIEGIKDKVKESKNRRAQSAALDRPH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1237 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Glsi05g1237 398 Pfam Protein tyrosine and serine/threonine kinase 92 371 IPR001245 GO:0004672|GO:0006468
Glsi05g1237 398 ProSitePatterns Protein kinases ATP-binding region signature. 95 128 IPR017441 GO:0005524
Glsi05g1237 398 MobiDBLite consensus disorder prediction 20 42 - -
Glsi05g1237 398 Gene3D Transferase(Phosphotransferase) domain 1 175 395 - -
Glsi05g1237 398 FunFam Serine/threonine-protein kinase BIK1 58 174 - -
Glsi05g1237 398 ProSiteProfiles Protein kinase domain profile. 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1237 398 CDD STKc_IRAK 95 372 - -
Glsi05g1237 398 PANTHER OS01G0588500 PROTEIN-RELATED 43 374 - -
Glsi05g1237 398 FunFam Serine/threonine-protein kinase PBS1 175 391 - -
Glsi05g1237 398 MobiDBLite consensus disorder prediction 11 42 - -
Glsi05g1237 398 Gene3D Phosphorylase Kinase; domain 1 73 174 - -
Glsi05g1237 398 SUPERFAMILY Protein kinase-like (PK-like) 64 374 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1237 Glsi-ChrGlsi05 61863750 61867100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1237 75 371 Glycoside Hydrolase AT3G07070 51.342 2.43e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi05g1237 PK_Tyr_Ser-Thr 1.1e-47 CL0016