Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1228 ATGGGAGGCTTATTGCGCATTTTTGAGTTCAATCAGGGGAGCATGGCCAAGAAAGTTCATGCCCGTAAGAGACATCATGGTGGTCTGGAAGCTCCTCGAAATAGCCTGGAGCTGCAAGTAGAAGCATCTCAGATCCATTGTCCAGAAGGAGAATTACCATACTATTATCAGGTAGAAGACTTGTCAGAAAATAAGTGTCCTTCAGATGAGGCTTCAATGAAGAAACTGATTAATGACGAGTTATCCAAACGACCAAGTACCAGACAAAATGCACCAAGCCTTGTGGCAAGGTTGATGGGGATAGATACGATGCCATTAGACTCTAAATCTGTAGTTTCATCAGATGAAAGAAAAAGTGAAAACTTAAAGAAGTTATCAGACAAGGAAGTGACTGGAAGGGGTTCGGGTGGTCGGGTTTCTTCCAACTCAGATTCTTCTAGCTGTATGGAATTTGACTCAGTTTACCAAGACAGAGATGATGATGATGGATGGAGCCAGTATTTGGGAAAGCCAAAGCCAAGGGAACATCCTCAGGAAGAGGAACTGCAGAAATTCAAGAAAGAATTTGAAGCATTCCAAGCAGCAAGGTTAACGGAGTGTTCAAAGCTTGTTGAAGTTGGCAATATTTCTAGACGATTGCTTGCTCAAAAGAACCGGAACAAGGAAAAGATGGCACATCATGCAAGTTCACAGAGACTGGCAACTGAGAAATCTACCGAGCTAGACAGCCGCTCCTTTAAAACAGACCTACTGAAAGATGGTGGTTCAGAATACCATGGGGATATGACGGAGTTACTCCCAGCTAAGCGTAAGGAATCCTTTCCTGCAAGGAGCAGAACCTTAAGTAGAGACTTTGAGGAGTCTTTAATGATGAAATCTCACAACAGATTGGATAGATCTTCTTCGCCCACTCGGATAGTAGTCTTGAAGCCTGGTCCTGATAGGGTTTACAACCATGGTGAGAATTGGATCAGTTCATCAGGCACTTTACAAGGGAGAAATAGCATAGAGGATTTTCTTGAGGAGGTGAGAGAGCGGCTAAAATGTGAACTACATGGAAAAAATCTCAAAAATGGTTCTGTGGTTCGAGGAAGTGGGATTGAGACACCTTTCAATGAAAAGCCATCAGATCCGAAACAAATAGCTCGTCATATAGCAAAACAGGTCAGAGAAAGCGTGACTAGGGATGTTGGAACAAATTTACTCCGCTCAGAATCAACAAGATCATACAGAAGTGAAATTCAGTTTAATGGACCAAGTTCCCCAGAATTTATTAACAGAGATACCAGGAGATTCTTGTCAGAGAGGCTAAGAAATGTTCTAAAATGTGAAACGCATCTTGATATTCCTGAAGTGACTTGTGGGAACTCAAGTTCATATGTCTTGGATAATCACGACGTTAGATTAAAACCAGCGAGTGATATTATGAATGCAAATGATTTAAGCCACTGGGAAATTTCAAAAGAGAAAAAACAAATGCAAACAGGATCTTTCAGGCGCGAACCAGATGACAATATATTGCTCCCCAGGGAACTGTCCCCTAGGAACCTTGTTAGATCCTTGTCTGCCCCTGTATCAGGAACATCGTTTGGAAAGCTTCTTTTAGAGGATCGCCACATTTTAACCGGCGCCCAAATTCGGAGGAAGCTAGAAGCCATTGAAACTGTGACTGCTGATGTTAAAAAAAAGAAGAAAGATAGGTTTAATATTAAAGAAAAAGTTTCCAATTTTAAATATAGTCTTGTTCTAAGAGGGAAGCTGTTTGGCAAAAGAATTCAGTCAATGGTGGAATCAAATGGCAATGAATATGGTCCCATGGTGAAAGATGTCACAAGCGGACCAACGGTTCTCATGAACTGTGGTGAGAGGCATGAGAACTCCACTGAGGTACCTCCAAGTCCTGCATCTGTATGCAGCAGTGCTCACGAAGAGCTATGGAGGCGGGCTGAATATTTAAGTCCAATATCAACTCCTGATGTATCTTCAAGAGACGACAGTGTTGTGCCCCAGGTGTTTAGAGAAATCAGCTCCGGTTTGAATGAGCTAAGAAGGCAGTTAAATCAACTTGAGTCTGATGGCCCCGGGGACTTAATGATCAAACAGGAGCCTGCTGAGTCTGAATTAGTTCAGTTAGAGGACCCGGCAGAATCTTACATAAGAGATCTGCTTGTTGCTTCTGGTTTGTACTTTGGTTCATGGGACAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCAATTGGGAACTCAGTTTTCGAAGAAGTGGAAGAATCTCATAAAATATTGGCGGAGGAGAATGGAAGTTCTGCAAAGGATCAAAATGACAGTAGGTCAGAGCACAAGATAATGCTTGATTTGTTAAATGAGGCACTTCCCATTGTTCTTGGACGACCTTTAACGTTGTCTAGATTCAGAAGGAAACTAAGCAGTTGCTCCATGCTGCCACCACCATGCGGAAAGGAACTTCTGAAGTCGGTATGGGACATGATACGTGTTTCTTTATATCCTCCATCTGACATATCTACTTGTTCGCTTGATAGTCTGGTAGCTCTAGATCTGGGATCCATCCCCTGGTTTGGATTGATAAATGACGAGATTAATATACTGGAAAGAGAGATAGAAAGTCTAATTACTGAAGACCTGGTTGAAGAGCTTACACGGGATATATGCTCTTAG 2676 0.4219 MGGLLRIFEFNQGSMAKKVHARKRHHGGLEAPRNSLELQVEASQIHCPEGELPYYYQVEDLSENKCPSDEASMKKLINDELSKRPSTRQNAPSLVARLMGIDTMPLDSKSVVSSDERKSENLKKLSDKEVTGRGSGGRVSSNSDSSSCMEFDSVYQDRDDDDGWSQYLGKPKPREHPQEEELQKFKKEFEAFQAARLTECSKLVEVGNISRRLLAQKNRNKEKMAHHASSQRLATEKSTELDSRSFKTDLLKDGGSEYHGDMTELLPAKRKESFPARSRTLSRDFEESLMMKSHNRLDRSSSPTRIVVLKPGPDRVYNHGENWISSSGTLQGRNSIEDFLEEVRERLKCELHGKNLKNGSVVRGSGIETPFNEKPSDPKQIARHIAKQVRESVTRDVGTNLLRSESTRSYRSEIQFNGPSSPEFINRDTRRFLSERLRNVLKCETHLDIPEVTCGNSSSYVLDNHDVRLKPASDIMNANDLSHWEISKEKKQMQTGSFRREPDDNILLPRELSPRNLVRSLSAPVSGTSFGKLLLEDRHILTGAQIRRKLEAIETVTADVKKKKKDRFNIKEKVSNFKYSLVLRGKLFGKRIQSMVESNGNEYGPMVKDVTSGPTVLMNCGERHENSTEVPPSPASVCSSAHEELWRRAEYLSPISTPDVSSRDDSVVPQVFREISSGLNELRRQLNQLESDGPGDLMIKQEPAESELVQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEESHKILAEENGSSAKDQNDSRSEHKIMLDLLNEALPIVLGRPLTLSRFRRKLSSCSMLPPPCGKELLKSVWDMIRVSLYPPSDISTCSLDSLVALDLGSIPWFGLINDEINILEREIESLITEDLVEELTRDICS 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1228 891 Coils Coil 672 692 - -
Glsi05g1228 891 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 890 - -
Glsi05g1228 891 MobiDBLite consensus disorder prediction 107 181 - -
Glsi05g1228 891 MobiDBLite consensus disorder prediction 135 152 - -
Glsi05g1228 891 MobiDBLite consensus disorder prediction 111 131 - -
Glsi05g1228 891 MobiDBLite consensus disorder prediction 219 241 - -
Glsi05g1228 891 Pfam DUF761-associated sequence motif 90 105 IPR032795 -
Glsi05g1228 891 MobiDBLite consensus disorder prediction 158 181 - -
Glsi05g1228 891 Pfam Domain of unknown function (DUF4378) 717 884 IPR025486 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1228 73 889 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 41.637 2.79e-167 502