Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1220 ATGGTTAGCAGAATCGCCGGCATTAAAAGGGCTGTAAGGACTGCCTTTGGAAAGGCTGATCATGCATTTGCTGATGCTAGTTCGCTCGATAGTTCATCTGGCACCACTGCTCTGACTGCCCTCATGCTGGGAAGGATCATGCTAATTGCCAATGTGGGGGATTCTCGTGCTGTATTGGGCAAACGGGGCAGAGCCGTTGAGCTTTCTAAAGACCATAAACCAAACTGCACTTCAGAAAGACTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGATACCTAAATGGCCAACTATCAGTAGCACGTGCTCTTGGAGACTGGCACATCAAGGGTGCTAAAGGTTCTAAAAGTCCCTTGAGCTCTGAGCCTGAGCTGGAGGAGATAGGTCTGACAGAAGAAGATGAGTTTTTGATAATGGGCTGTGATGGCTTATGGGATGTGATGAGCAGCCAGTGTGCTGTGACAATGGTGAGGAAAGAGCTCATGCAGCATAACGATCCCGCAAAGTGTGCGAAAGCACTTGTGATAATCTGA 537 0.4786 MVSRIAGIKRAVRTAFGKADHAFADASSLDSSSGTTALTALMLGRIMLIANVGDSRAVLGKRGRAVELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGAKGSKSPLSSEPELEEIGLTEEDEFLIMGCDGLWDVMSSQCAVTMVRKELMQHNDPAKCAKALVII 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1220 178 PANTHER PROTEIN PHOSPHATASE 2C 9 165 IPR015655 GO:0004722|GO:0006470
Glsi05g1220 178 SUPERFAMILY PP2C-like 6 176 IPR036457 -
Glsi05g1220 178 Gene3D - 3 177 IPR036457 -
Glsi05g1220 178 ProSiteProfiles PPM-type phosphatase domain profile. 1 178 IPR001932 -
Glsi05g1220 178 SMART PP2C_4 1 178 IPR001932 -
Glsi05g1220 178 Pfam Protein phosphatase 2C 10 176 IPR001932 -
Glsi05g1220 178 CDD PP2Cc 8 176 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1220 Glsi-ChrGlsi05 61752051 61753639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1220 9 176 PP2C-type Phosphatase Gene Family AT3G51470 85.714 7.57e-105 301