Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1210 ATGGATGCCGTCGAGGGTACGCCTAGGTATTACGGGCTCTGCGCCATGGGAGGAATGCTCAGTGCCGGCACCACCCATCTCGCCATCACTCCTTTTGACGTCTTAAAAGTCAATATGCAGGTGCACCCAATTAAGTATTACAGCATTTCCTCGTGCTTTACTACCATATTAAGAGAACAAGGGCCTTCTGCTCTCTGGAGAGGTTGGACCAGCAAGTTCTTTGGGTACGGTGTTCAAGGAGGCTTCCGATTTGGTCTCTATGAGTATTTTAAGGGACTTTATTCCAACATAATGGTAGACCATAATAGAAGTCTGATTTTCTTTCTTAGTAGCGCATCCGCTGAAGTATTTGCCAATATAGCTCTCTGCCCATTTGAAGCTGTTAAAGTGAGGGTGCAAGCACAGCCCTGTTTTGCTAAGGGATTATTTGATGGCTTTCCAAAGTTATATGCATCAGAAGGCACGCAAGGATTCTACCGTGGGCTTATTCCACTTTGGGGCCGAAACCTTCCATTTTCTGTGGTCATGTTCTCAACATTCGAGCATTCTGTTGAATTTTTGTATCGCAAAGTTGTTAAAAGAAGAAAGGAGGATTGTTCAGTAGCTCAACAACTTGGTGTGACATGTTTAGCTGGATATGCAGCTGGATCTGTTGGTAGCTTGATTTCTAACCCTGCTGACAATATTGTAGCTTCTCTTTATAACAGAAAAGCTGATAGTCTCACTCTGGCTATCAGAAACATTGGGCTAACTAATCTATTTACAAGGAGCCTTCCTATTAGAATACTGCTGGTTGGCCCTTCTATAACTTTGCAATGGTTATTCTATGACACAATCAAAATCTTAGGTGGCCTGTCAACTAGTGGTGAAGTTGCGACTGACTTGGGAGGAAATAAGGTGCAGCCTCATATATCAGATGCATTGTGTCAATATCAACCCTGCTTTCTGGGAAGGCTTTCGGTTGGCCCGCTTAACTACCATCATTTAGCTCAAAAGATTGATGGTCATGTCCTGCCAAATTGCCATAACTGGGACTGGACCCAACTCACTTTCATGACAAATGCCACCACCCCGGATTTAGGAACTCCACAAATTTTAAGTGTCGCATTAATAACAAGTGTGGCAGTTGCAAATTGA 1137 0.4354 MDAVEGTPRYYGLCAMGGMLSAGTTHLAITPFDVLKVNMQVHPIKYYSISSCFTTILREQGPSALWRGWTSKFFGYGVQGGFRFGLYEYFKGLYSNIMVDHNRSLIFFLSSASAEVFANIALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTQGFYRGLIPLWGRNLPFSVVMFSTFEHSVEFLYRKVVKRRKEDCSVAQQLGVTCLAGYAAGSVGSLISNPADNIVASLYNRKADSLTLAIRNIGLTNLFTRSLPIRILLVGPSITLQWLFYDTIKILGGLSTSGEVATDLGGNKVQPHISDALCQYQPCFLGRLSVGPLNYHHLAQKIDGHVLPNCHNWDWTQLTFMTNATTPDLGTPQILSVALITSVAVAN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1210 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 282 IPR018108 -
Glsi05g1210 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 93 IPR018108 -
Glsi05g1210 378 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 292 IPR044677 GO:0005315|GO:1990547
Glsi05g1210 378 SUPERFAMILY Mitochondrial carrier 13 278 IPR023395 -
Glsi05g1210 378 Gene3D Mitochondrial carrier domain 14 283 IPR023395 -
Glsi05g1210 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 186 IPR018108 -
Glsi05g1210 378 Pfam Mitochondrial carrier protein 15 95 IPR018108 -
Glsi05g1210 378 Pfam Mitochondrial carrier protein 108 190 IPR018108 -
Glsi05g1210 378 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 12 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1210 Glsi-ChrGlsi05 61675169 61679997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1210 1 300 Chloroplast and Mitochondria Gene Families AT2G17270 67.000 3.61e-154 435
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1210 05 61675169 61679997 Glsi05g1210 05 61675169 61679997 ECH