Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1181 ATGTATGACATGGTCGGCTCCACCCACGTCCGAGACGTCGACCTTTTCTGCTCTCAAATGGATGCCTCCCCCCACCAAAGGAAGGTAGTAGACGAACACGTGAAAGCAACTTATGAATCGTTGGTAGAAATGGCACAAAAGATTGCAGAGTCAATGGGGGTGAAGCGTGGGGACTTCAAGGAGTGGCCATGCCAGTGGAAGATTGACAGATATAGTTTCAGCCCAGAAACTATAGGCCACTCTGGTATCCAAATACACACAGATTCAGGGTTCCTCACCATACTCCAAGATGATGAAAATAATGGTGGTCTTGAAGTCATGGATAAGTCTGGTTCCTATGTGGAAGTCCCTTGCGCGGCAGGGAGCCTGCTTTACCTTCTTGGGGATGTTGCTCATGTATGGAGCAATGGAAGGTTTCCGACAGTGAAGCATCGCGTAATATGCAGGGAAGCAAGATTTCGATTCTCGACTGCTTTATTTCTGTTGGCGCCGAAGGAAGGAACCGTTGAAGCACCAGAGGAGTTCGTGGACTCTGATCATCCCCCTGTGGAAAATGTAACAGTAGTGTCAATTACCACCATGGAGGAATTGAATAACAAAATACAAAGAGGATCTGAAGAACGGCATACGTCTGGAACACAAACGAATGAAGAGAGCTCAAGATCTCATCTTATATTATCAATTGTAGTTGAAACTACCAACCTTCAAAGTCAATCAGCTGCAAGAGAAAAGTTGGTTCTGTTGTTTGCTTCTAGAAATCTGTCATGCATCAGGTTGACTTTCAGGTATGCATCAAGGGTGAGATCAATAGCGAATGATCCTCGCAAAATTGTTTCTTCAAAAGAGGTAGCACGATTGAAGAAGTTGGTTGCATATTGGAAGGAACGAGCAGAGAGAAAGGGTGACGATGAAGATTTAGAAGACATTCTAGAAAAAAGACTAACCAGAGAGAGGACAGATGGCCGCAATTCCATTGGCTACATAGCACCAAGTGCTGCCAATCCTCTGTACGACGCCTTGGGACTTTATGACATGGGTTCCTCCCAAGCTGTGCAGCTTTTCTGCTCCCAATTGGATGCCTCACCCCACCAAAGGAAGATAATAGAGGAATACGGCCAGGCAGTTCATGACCTGTTAATGGATATAGGACTAAAGATGGCAGAGTCTCTGGGCTTAAAGGGTGTTGATTTCAAGGAGTGGCCGTGCCAGTTCAGGATCAACAAATATAGCTTCACCCCAGAAACCATAGGCTCCCCTGGTGTTCAAATACACACAGATTCAGGTTTCCTCACCATACTCCAAGATGATGAAAACGTTGGTGGTCTTGAAGTGATGAACAAGTCTGGTTCCTTTGTGGAAGTCCCTCCAAAAGCAGGGACTCTCTTTGCCCTTCTTGGGGATGTTGCTCATGTGTGGAGCAATGGAAGGTTTCGGTATGTGAAGCATCGTGTAGAATGCAAGGAAGCGAGTGTTCGCGTGTCAATAGCTTCGTTTCTGTTGGGGCCAAAGGAAGGAAATGTTGAAGCACCAAAGGAGTTGGTGGACTCTGATCACCCACGTCTCTTTCTTCCTTTTGCATATGAAGATTACAGGAGACTCAGAGTATCGCAAAACAAGAATGCTAGTGAAGCCCTCGCGCTGTTACTCACCCATCGTTGA 1659 0.4611 MYDMVGSTHVRDVDLFCSQMDASPHQRKVVDEHVKATYESLVEMAQKIAESMGVKRGDFKEWPCQWKIDRYSFSPETIGHSGIQIHTDSGFLTILQDDENNGGLEVMDKSGSYVEVPCAAGSLLYLLGDVAHVWSNGRFPTVKHRVICREARFRFSTALFLLAPKEGTVEAPEEFVDSDHPPVENVTVVSITTMEELNNKIQRGSEERHTSGTQTNEESSRSHLILSIVVETTNLQSQSAAREKLVLLFASRNLSCIRLTFRYASRVRSIANDPRKIVSSKEVARLKKLVAYWKERAERKGDDEDLEDILEKRLTRERTDGRNSIGYIAPSAANPLYDALGLYDMGSSQAVQLFCSQLDASPHQRKIIEEYGQAVHDLLMDIGLKMAESLGLKGVDFKEWPCQFRINKYSFTPETIGSPGVQIHTDSGFLTILQDDENVGGLEVMNKSGSFVEVPPKAGTLFALLGDVAHVWSNGRFRYVKHRVECKEASVRVSIASFLLGPKEGNVEAPKELVDSDHPRLFLPFAYEDYRRLRVSQNKNASEALALLLTHR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1181 552 SUPERFAMILY Clavaminate synthase-like 318 544 - -
Glsi05g1181 552 MobiDBLite consensus disorder prediction 200 214 - -
Glsi05g1181 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 299 IPR027417 -
Glsi05g1181 552 Gene3D - 8 208 IPR027443 -
Glsi05g1181 552 SMART kinesin_4 49 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1181 552 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 173 - -
Glsi05g1181 552 MobiDBLite consensus disorder prediction 199 219 - -
Glsi05g1181 552 Pfam 2OG-Fe(II) oxygenase superfamily 403 499 IPR044861 -
Glsi05g1181 552 Pfam 2OG-Fe(II) oxygenase superfamily 72 161 IPR044861 -
Glsi05g1181 552 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 398 502 IPR005123 -
Glsi05g1181 552 Pfam Kinesin motor domain 179 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1181 552 Gene3D - 303 548 IPR027443 -
Glsi05g1181 552 SUPERFAMILY Clavaminate synthase-like 21 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1181 Glsi-ChrGlsi05 61408158 61414507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1181 233 321 Calmodulin-binding Proteins AT5G65930 48.936 8.40e-16 79.3