Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1171 ATGGCGGCAGCAGCATCCGGGTCATCGGCAGCAGTGGGGGGAGACATATGGAAAGCCCATTTGGCTCTGGCGATGGGGCAGCTATTCAATGGAGGCTACCATGTCATAACCAAATTGGCCCTCAACGTTGGGGTCAATCAGTTAGTCTTCTGCGTCTTCCGCGATATTCTTGCTCTTTCTATTCTTGTTCCCCTCGCTTGTATCCGTGAAAAACAGATGCGACCACCCTTGACTTGGCACCTCCTGGTGTCGTTCTTATTTCTTGGTCTAACTGGGATATTTGGCAACCAGCTTCTGTTTCTTCTTGGTTTAAACTATACTAATCCAACTTATGCTGCTGCCACACAGCCAGCCATTCCAGTCTTTACATTTCTCTTGGCTGCGATGATGGGTACAGAAAGAGTGAACTTGTTCAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTTTTGTCTGTGTTTCTGGTGCCATATTCATGGTATTGTATCGTGGTCCAGGACTGATAGGATACTCAGAAATGGACATCACAGCACAAAGTGCAATAAGCACCAACGGACAACCTGAGCCATCTGGATGGTTGATTGGGGGTTTTCTGGATCTGGGGTTAGACAATTTTCACCTTGGAGTTCTGTGCTTGATAGGAAACTGCATGTGCATGGCTGCTTTTCTAGCCTTTCTGGCTCCTGTTTTAAAAAGGTATCCTGCCAACCTATCTGTGACAGCATATTCATACTTCTTTGGAGCTTTGCTGATGGTGATAACAGCATTCTTCATGACTAATGAGTCGACAGACTGGAGTTTGACACAGTCAGAAATATTTGCCGTTATCTATGCTGGAACAATTGCATCTGCCCTTAATTATGGACTTTTGACATGGTCCAATAAGATCTTGGGGCCAGCCATGGTTGCTCTTTATAATCCACTTCAACCTGCCGCTTCTGCCATCCTGTCACGAATTTTCCTTGGAAGTCCAATTTATTTGGGAAGTGTGATAGGGGGATCTTTAATTATTGTGGGACTATATGCGGTTACTTGGGCATCTTACAGAGAAAGACAGGCAGAGGCAAGTGTTGGAGTTATTCCTCATGTCTCTCGGGTCTCTGAACCACTTATTCGTGCGGATGGTCTCCTCGACAAGAATTCATACCCAGGAGGTGTATGTGTATCATCAAAGCCTTCGGATTAA 1185 0.4565 MAAAASGSSAAVGGDIWKAHLALAMGQLFNGGYHVITKLALNVGVNQLVFCVFRDILALSILVPLACIREKQMRPPLTWHLLVSFLFLGLTGIFGNQLLFLLGLNYTNPTYAAATQPAIPVFTFLLAAMMGTERVNLFRYEGLAKVGGTFVCVSGAIFMVLYRGPGLIGYSEMDITAQSAISTNGQPEPSGWLIGGFLDLGLDNFHLGVLCLIGNCMCMAAFLAFLAPVLKRYPANLSVTAYSYFFGALLMVITAFFMTNESTDWSLTQSEIFAVIYAGTIASALNYGLLTWSNKILGPAMVALYNPLQPAASAILSRIFLGSPIYLGSVIGGSLIIVGLYAVTWASYRERQAEASVGVIPHVSRVSEPLIRADGLLDKNSYPGGVCVSSKPSD 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1171 394 PANTHER WAT1-RELATED PROTEIN 21 351 IPR030184 GO:0016020|GO:0022857
Glsi05g1171 394 Pfam EamA-like transporter family 207 344 IPR000620 GO:0016020
Glsi05g1171 394 Pfam EamA-like transporter family 21 144 IPR000620 GO:0016020
Glsi05g1171 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 349 - -
Glsi05g1171 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1171 Glsi-ChrGlsi05 61303847 61308857 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1171 102 374 Nodulin-like Gene Family AT5G45370 67.273 4.79e-129 370