Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1169 ATGCCAGAAGCATCCGATTCAGCCGCAGCATCGGGAGGAGATATATGGAAGGCCCATTTGGCTTTGGCGCTGGTGCAGCTACTCTATGGAGGCTACCACGTCGTCACCAAATTAGCCCTCAATGTTGGGGTCAACCAATTAGTCTTCTGCGTCTTCCGCGATCTTCTAGCTCTTGCTATTCTTTCTCCCATTGCTTTTGTCCGTCAAAAACTGCCGCGACTGCCCTTGACTTGGCGCCTCCTGACGTCTTTCTTCTTTCTTGGATTAACTGGGATATTTGGCAATCAGATTTTGTTTCTTCTTGGTTTAAGCTATACTAGTCCAACTTATGCTGCTGCCACCCAGCCGGCTATTCCAGTCTTTACATTTCTCTTGACTGTGATGATGGGTACAGAAAGAGTGAACTTGCTCAGATATGAAGGTCTAGCTAAGGTCGGAGGAACTTTTGTCTGTGTTTCTGGTGCTTTATTGATGGTTTTGTATCGCGGTCCAGTACTAATAGGATACACAGAAATGAACATTATAACACCAAGTGAAATAAGTGCCAAGAGTCAACCCGAGCCATCTGGATGGTTAATTGGTGGTTTGCTGGATCTTGAGTTAGACACTTTTCACCTTGGATGTCTATGCTTGATAGGGAACTGCATTTGCATGGCTGCTTTTCTGGCCATTCAGGCTCCTGTATTAATAAAGTATCCTGCCAACCTATCTGTAACAGCATATTCATACTTCTTTGGAACTTTGCTGATGGTGATAACCACATTCTTCATGAGTAATGATTCAATAGACTGGAGTTTGACGCAGTCTGAAATATTTGCCGTCATTTATGCTGGAACAGTTGCATCTGCCCTTAATTATGGACTCTTGACATGGTCCAATAAGATCTTAGGGCCAGCTATGGTTGCCCTTTATTATCCTCTTCAACCTGCGGCTTCTACTCTCCTGTCACAAATTTTCCTTGGAAGTCCAATTTATTTGGGAAGTGTGATAGGGGGATCATTAATTATTGGGGGGCTATATGCGGTTACTTGGGCATCTTATAGAGAAAGACAAGCGGAGGCAGTAGTTGGAGTTATTCCTCATGTCTCTTGGGTCTCTGAACCACTTATTCATACGGATGCTCTACTCAACAAGAATTCATACTCAAGAGGTGTATCTGTATTACCAAAGCCTTCAGATTAA 1182 0.4365 MPEASDSAAASGGDIWKAHLALALVQLLYGGYHVVTKLALNVGVNQLVFCVFRDLLALAILSPIAFVRQKLPRLPLTWRLLTSFFFLGLTGIFGNQILFLLGLSYTSPTYAAATQPAIPVFTFLLTVMMGTERVNLLRYEGLAKVGGTFVCVSGALLMVLYRGPVLIGYTEMNIITPSEISAKSQPEPSGWLIGGLLDLELDTFHLGCLCLIGNCICMAAFLAIQAPVLIKYPANLSVTAYSYFFGTLLMVITTFFMSNDSIDWSLTQSEIFAVIYAGTVASALNYGLLTWSNKILGPAMVALYYPLQPAASTLLSQIFLGSPIYLGSVIGGSLIIGGLYAVTWASYRERQAEAVVGVIPHVSWVSEPLIHTDALLNKNSYSRGVSVLPKPSD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1169 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 160 - -
Glsi05g1169 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 348 - -
Glsi05g1169 393 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020
Glsi05g1169 393 Pfam EamA-like transporter family 18 143 IPR000620 GO:0016020
Glsi05g1169 393 PANTHER WAT1-RELATED PROTEIN 20 350 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1169 Glsi-ChrGlsi05 61295602 61300835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1169 101 373 Nodulin-like Gene Family AT5G45370 64.364 1.37e-120 349