Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1142 ATGGCACCTGTACGTTCTCCCACCGAGTTTTGTACGTGGCACAGTGAGCCTGAACTCGTGGTGCCTGCAGAACCAACTCCACTTGAAACGAAGAAGCTATCAGACATAGATGACCAACAAGGACTTCGATTTCAGCTTCCTTTTATAATGTTCTACGAACACAATCCATTTAAGGAAGGACAAGACCCTGCTTTGGTCATCAAAGAAGCTTTAGCTCAGGCACTCGTCTATTACTACCCACTTGCTGGTAGGCTCCGAGAAGGGCCTAACAGAAAACTTATGGTGGATTGTACTGGGGAAGGTGTCTTGTTCGTTGAAGCCGATGCTGCCATTTCCCTTCAGCAGCTTGGCCACACAACTCTGCCACCATGTCCCTATATGAAGGAGTTCCTTTCTGAGGTGCCTGGCTCTGAAGGAATTCTTGGATGCCCTCTATTGTTGGTTCAGGTAACCCATCTTAGTTGCGGAGGATTTGTGTTAGCAATTCGCATGAACCACACAATATGCGACTCACTTGGCCTTGTCCAATTCCTCAACATGGTGGCTGATTTTGCAAGAGCCGCTCCCATCTCCCACGCCCCTGTGTGGCAAAGAGAACTGCTAACTGCAAGAAACCCACCTCGCATCACTTGCATACACCATGAATATGAACTTGATGAACCAGTTCACTATTGTAACACACAGACAATGGATGCCAATGAACAAATGGCCCACGAGTCTTTCTTCTTTGGCCCCAAAGAGATCCTTTCAATTCGCAAGCATCTTCCCCTTCACCTTCGAAAATGCTCAACTTTCGAGATCCTCTCCGCTTGTCTGTGGAAATGCCGTACAGAAGCTCTTGAGCTGAAACCCAATGAGATTGTGGGCATTTCACCCTTTGTTAATGCTCGGGGCAAGCAGGGTCTGGAGGTGCCTGATGGGTATTACGGCAATGCTTTTGCCTTCCCAATTGCGCTATCAGAAGCTGGATTGCTATGCAAAAACCCATTGGGGTATGCACTGGAGTTAATAAGAAAGGCTAAGGCACAAATGACCAAAGAGTACATAAGTTCAGTGGCTGATCTCATGGTACTCAAAGGGCGTCCAATGTATAGGACAGTTGAGAACTATCTCGTTGCTGATACAACTCGAGTGGGATTTCAGAGAGTGGATTTTGGGTGGGGAAAACCAGTGTATGGTGGCCCTGCAGGGGCCATACCATTCGTTAGCTTCTATGCAAGGTTCAGGAATAGGGAAGGTGAGGATGTAATTGTGGTGCCAACACTGCTGCCACGGCCTGCCATGAAGAGGTTCCTTTCTGAGCTGGCGAGGATCACAAGCGAGGAGGTTGTGGATGTGTATTATGAGAACACAGTGGCCATGGAAATCAGATCGATGTTATAA 1383 0.4779 MAPVRSPTEFCTWHSEPELVVPAEPTPLETKKLSDIDDQQGLRFQLPFIMFYEHNPFKEGQDPALVIKEALAQALVYYYPLAGRLREGPNRKLMVDCTGEGVLFVEADAAISLQQLGHTTLPPCPYMKEFLSEVPGSEGILGCPLLLVQVTHLSCGGFVLAIRMNHTICDSLGLVQFLNMVADFARAAPISHAPVWQRELLTARNPPRITCIHHEYELDEPVHYCNTQTMDANEQMAHESFFFGPKEILSIRKHLPLHLRKCSTFEILSACLWKCRTEALELKPNEIVGISPFVNARGKQGLEVPDGYYGNAFAFPIALSEAGLLCKNPLGYALELIRKAKAQMTKEYISSVADLMVLKGRPMYRTVENYLVADTTRVGFQRVDFGWGKPVYGGPAGAIPFVSFYARFRNREGEDVIVVPTLLPRPAMKRFLSELARITSEEVVDVYYENTVAMEIRSML 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1142 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 431 - -
Glsi05g1142 460 Gene3D - 14 218 IPR023213 -
Glsi05g1142 460 Pfam Transferase family 17 434 - -
Glsi05g1142 460 Gene3D - 219 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1142 Glsi-ChrGlsi05 61097398 61098919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1142 16 401 Monolignol Biosynthesis Gene Families AT5G48930 29.040 2.93e-48 169