Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1139 ATGAAGCTTTCTTCATCTTACTTAACTGCCTTCTTGTCCATATGCCTCCATATGGTTCTTCTCTTTTCTGCCAACCTACGATGGTTGCAACCTAAGATTACTGCAAGTGCATTAGGAAATGACACAGACCAATTGGCATTGTTCAGATTTAAAGAAGCAGTAGAACACGACCCATTTAATATCTTGAGCTCTTGGAATATCTCTACTCACTTTTGCAGCTGGAAAGGAATCACATGCAGCCTCAGACATCAAAGAGTCACAGCCTTGAACCTACAAGCTTATCACTTGCGTGGGTTGATACCACCAGATATTGGCAACCTCACCTTTTTAAGGTACATCAACCTTCAAAACAACAGCTTCTACGGTGAAATCCCACAGGAAATGGGTCGTTTATTTCGGCTGCAGCAGCTGTTTCTCACCGATAACACATTAAGGGGACAAATTCCGACCAACTTGTCTGGCTGTTCTGAACTCAGGAGCTTGAGTTTATCAGGAAACAAGCTTGTTGGTAAAATACCTTTGGAGCTTGACTTTCTAACAAAGCTAGAAGAGTTATATATTGCTGTGAACAATTTGACAGGTGAGATCCCAGCTTCCATAGGGAATCTTTCTTCTCTAAACGTTCTCTCTTTAGGGATTAATAACTTGGAGGGAGATGTACCTGAAGAGATAGGCCTTCTGGGTAACTTGACCCATCTCTCTATTGCATCCAACAAACTTTCTGGTATGCTTCCTTCTTCACTTTACAATATATCATCTCTCACCTTCTTCTCAGCTGGAGCCAACCAGTTTAATGGCTCTTTACCTCCCAACATGTTCCTCACCCTCCCTAATCTCCAACAATTTGGCATTGGACAAGTTCCTACTGGCATTGGAAACCTACGAGATTTGAATTTGAATAACTTTGGAGGTTCTTTACCCAACTCTATAGCCAATTTGTCAAGTCAACTGAACCAGTTCTATATTGGTGGCAATCCGATTGCTGGGACTATACCTGCAGGCTTGGAAAATCTCGTTAACTTGATTGCCTTGGACTTGGAGTTCAATCATCTCACAGGGTCCATTCCAGCTTCTTTTGGGAAGTTTCAAAAGATGCAATCATTGACTTTAAACGTAAACAAACTGTCAGGAGAAATCCCATTGTCCATCGGAAACCTTAGTCAGTTGTTTCAACTTGATTTGTCACATAACATGCTAGAAGGAAGCATTCCTCCTAGTATTGGCAGTTGCCAATATTTACAGTACCTGGACCTTTCACATAACAACCTAACAGGAGCTATTCCCTCACAGGTCGTTGGTCTGTCATCCTTATCTTTGTTACTGAACTTATCTCAGAACTCATTTAATGGCAGCCTGCCCATTGAGGTTGGCAACCTTAAAAGCATCAATAAGTTGGATGTTTCTAAAAATGCTCTGTCTGGTGACATTCCAGGAACAGTTGGACAGTGCATAAGCTTGGATTACCTTAACTTACAAGAAGGTCTAAAGTATATTCTTGTTATAGAATACCTGAATGTTTCTTTCAATATGTTGGATGGTGAAGTACCAAAGGGAGGTGTCTTTAGAAATGCAAGTGCATTATCATTGGAAGGAAACAGTGAACTCTGTGGGGGTATCACAGAGCTACACCTGCCACCATGTCCTACCGAAGTTGTTATGAAACACAGAAAACATCATGCTTGGAAGCCAAGCAATGTCCTTCTTGACAATGACATGGTTGCTCATGCTAGTGACTTTGGATTAGCAAGACTTCTCTGGACTATTAATGGCGTCTCCCATAATCAAACTAGCACAATTGGGATAAAGGGAACTGTTGGCCATGCTCCTCCAGAGTATGGAATAGGAGTTTCAACACAGGGCGATGTGTATAGCTTTGGAATTCTTGTGTTGGAAATACTGGCAGGAAGGAGACCCACAGATGAAATGTTTATAAATGGTCTCAATCTCCATAACTATGTCAAGAACTCCTTGTCAGATACATTTCTACCAATAGGGGACCCAACCCTTCTCCTTGGAGAATTGAAAGAAACGGCTTTTCCAGCAGAAGAAGAAAACGACAAGAATGATCAGAAGCTGAGTCAGATGCATCCTAATGATCTGGAGAAGTGCCTACTTGAACTTTTTTGCATTGGACTTGCTTGTTCAGCTGAATCACCAAAAGAAAGAATGAATATGAGGGATGTCACAAGGGAACTAGATCTAATCAGAAATGCTTTTCTTGCCGGTAAATCAATTTAG 2238 0.4133 MKLSSSYLTAFLSICLHMVLLFSANLRWLQPKITASALGNDTDQLALFRFKEAVEHDPFNILSSWNISTHFCSWKGITCSLRHQRVTALNLQAYHLRGLIPPDIGNLTFLRYINLQNNSFYGEIPQEMGRLFRLQQLFLTDNTLRGQIPTNLSGCSELRSLSLSGNKLVGKIPLELDFLTKLEELYIAVNNLTGEIPASIGNLSSLNVLSLGINNLEGDVPEEIGLLGNLTHLSIASNKLSGMLPSSLYNISSLTFFSAGANQFNGSLPPNMFLTLPNLQQFGIGQVPTGIGNLRDLNLNNFGGSLPNSIANLSSQLNQFYIGGNPIAGTIPAGLENLVNLIALDLEFNHLTGSIPASFGKFQKMQSLTLNVNKLSGEIPLSIGNLSQLFQLDLSHNMLEGSIPPSIGSCQYLQYLDLSHNNLTGAIPSQVVGLSSLSLLLNLSQNSFNGSLPIEVGNLKSINKLDVSKNALSGDIPGTVGQCISLDYLNLQEGLKYILVIEYLNVSFNMLDGEVPKGGVFRNASALSLEGNSELCGGITELHLPPCPTEVVMKHRKHHAWKPSNVLLDNDMVAHASDFGLARLLWTINGVSHNQTSTIGIKGTVGHAPPEYGIGVSTQGDVYSFGILVLEILAGRRPTDEMFINGLNLHNYVKNSLSDTFLPIGDPTLLLGELKETAFPAEEENDKNDQKLSQMHPNDLEKCLLELFCIGLACSAESPKERMNMRDVTRELDLIRNAFLAGKSI 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1139 745 Pfam Leucine rich repeat 341 399 IPR001611 GO:0005515
Glsi05g1139 745 Pfam Leucine rich repeat 181 240 IPR001611 GO:0005515
Glsi05g1139 745 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 153 242 - -
Glsi05g1139 745 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 289 496 - -
Glsi05g1139 745 SUPERFAMILY L domain-like 296 537 - -
Glsi05g1139 745 Gene3D Ribonuclease Inhibitor 40 194 IPR032675 -
Glsi05g1139 745 Gene3D Ribonuclease Inhibitor 403 540 IPR032675 -
Glsi05g1139 745 Gene3D Transferase(Phosphotransferase) domain 1 541 741 - -
Glsi05g1139 745 Pfam Protein tyrosine and serine/threonine kinase 563 645 IPR001245 GO:0004672|GO:0006468
Glsi05g1139 745 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 42 152 - -
Glsi05g1139 745 Gene3D Ribonuclease Inhibitor 290 402 IPR032675 -
Glsi05g1139 745 Gene3D Ribonuclease Inhibitor 195 289 IPR032675 -
Glsi05g1139 745 PANTHER LEUCINE RICH REPEAT KINASE 2 558 733 - -
Glsi05g1139 745 SUPERFAMILY Protein kinase-like (PK-like) 555 730 IPR011009 -
Glsi05g1139 745 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Glsi05g1139 745 ProSiteProfiles Protein kinase domain profile. 348 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1139 745 SUPERFAMILY L domain-like 41 299 - -
Glsi05g1139 745 PRINTS Leucine-rich repeat signature 459 472 - -
Glsi05g1139 745 PRINTS Leucine-rich repeat signature 413 426 - -
Glsi05g1139 745 SMART LRR_typ_2 227 250 IPR003591 -
Glsi05g1139 745 SMART LRR_typ_2 338 361 IPR003591 -
Glsi05g1139 745 SMART LRR_typ_2 386 410 IPR003591 -
Glsi05g1139 745 SMART LRR_typ_2 107 131 IPR003591 -
Glsi05g1139 745 SMART LRR_typ_2 179 203 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1139 Glsi-ChrGlsi05 61074595 61084974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1139 558 744 Receptor kinase-like Gene Family AT5G20480 40.000 2.41e-33 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi05g1139 PK_Tyr_Ser-Thr 5.8e-08 CL0016