Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1136 ATGATTTCTGTTTCCCATGCATCCAATAGCCGCTCTCTCTCCTCTGCTACGGTACAGGCTGTAGAAGCAGCCTACTCAGTCAATAGTCATGCACTCTCTCTAAAAACAGACAAGAGATCACGTACTTCCTGTACGCCAGCTGGTTGGTCATCCCATTCGGCATTTTCCCATTTTCCATTCAGATTCTGCGGAATGGAGAGTACAAGAATAGGCTCAGCATTGAAATTGAATCTTTTGGTATGTGTACTGATATTGCTGAAGGCAGAAGGCTTTTTGGTACCAATCACTTATGTTGAGAATGCAGTAACAAAAGGAGCTGTTTGTTTGGATGGGAGCCCGCCGGCTTACCACTTTGATAAGGGATTTGGGGCAGGGATTAATAAATGGCTTGTTCACATTGAGGGAGGAGGATGGTGCAACAATGTCACTACCTGCCTTTCCCGTAAGAACACTCGCTTGGGTTCATCTAAGCAAATGGCCAAGAAGATTGCCTTTTCTGGAATTCTAAGTAACAAGCAACAGTTTAATCCAGATTTCTACAATTGGAACAGAATTAAGGTTAGGTACTGTGATGGTGCATCATTCACTGGTGACGTGGAAGCAGTCCATCCAGCCACAAATTTGCACTTCAGAGGAGCAAGAATTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTGAAAATGCTATTCTCTCTGGTTGTTCAGCCGGAGGAATGACTTCGATATTGCATTGTGATCGCTTCCAAGCTCTATTACCTACGGGTGCTAAAGTGAAATGCCTTTCAGATGCTGGCTACTTTATCAATGCAAAGGATGTCTCAGGAGCACCACACATTGAACAATTTTACAGTCAAGTTGTTGCAACACATGGTTCGGCAAGCAATTTGCCTCAATCCTGCACTTCAAGACTCAGCCCAGGGCTATGCTTTTTCCCACAATATGTGGCATCTCAAATCAGTACACCAATTTTCTTTGTAAATGCAGCCTATGATTCGTGGCAGATAAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCATGGCCACTGGCATAGCTGCAAACTTGATATAAGCAACTGCTCATCTGATCAACTCAGTATAATGCAAGGCTTCAGGTTGGACTTCTTAAAGGCATTGAGCGTGCTTGGAAACTCTTCGTCTAAAGGAATGTTTATAGACTCTTGCTATGCCCACTGCCAAACTGAAATGCAGGAGACATGGTTAAGAAGGGACTCTCCGCTGCTGAGCAATAGAACAATTGCAAAGGCAGTAGGAGACTGGTACTTTGAACGAAGTCCTTTCCATCAGATCGATTGCGCTTATCCTTGCAACCCCACTTGTCATAACCGTGTATTTGAGCCACAAGACCACCCAGGAGTATAG 1398 0.4399 MISVSHASNSRSLSSATVQAVEAAYSVNSHALSLKTDKRSRTSCTPAGWSSHSAFSHFPFRFCGMESTRIGSALKLNLLVCVLILLKAEGFLVPITYVENAVTKGAVCLDGSPPAYHFDKGFGAGINKWLVHIEGGGWCNNVTTCLSRKNTRLGSSKQMAKKIAFSGILSNKQQFNPDFYNWNRIKVRYCDGASFTGDVEAVHPATNLHFRGARIFVAVIEDLLAKGMKNAENAILSGCSAGGMTSILHCDRFQALLPTGAKVKCLSDAGYFINAKDVSGAPHIEQFYSQVVATHGSASNLPQSCTSRLSPGLCFFPQYVASQISTPIFFVNAAYDSWQIKNILAPGVADPHGHWHSCKLDISNCSSDQLSIMQGFRLDFLKALSVLGNSSSKGMFIDSCYAHCQTEMQETWLRRDSPLLSNRTIAKAVGDWYFERSPFHQIDCAYPCNPTCHNRVFEPQDHPGV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1136 465 PANTHER NOTUM-RELATED 80 454 IPR004963 GO:0016787
Glsi05g1136 465 Pfam Pectinacetylesterase 87 438 IPR004963 GO:0016787
Glsi05g1136 465 SUPERFAMILY alpha/beta-Hydrolases 207 338 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1136 Glsi-ChrGlsi05 61055538 61060269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1136 76 465 Carbohydrate Esterase AT4G19420 62.824 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1136 05 61055538 61060269 Glsi05g1136 05 61055538 61060269 ECH