Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1127 ATGATACACCATCCTCAAGTGGTACAGAGGGAACAAAGATCAAAGAATAAGAAAGAGTTCCAACTTTTGACTCCTCCTTTGATGGGGTTGTGGATCTATCTTCTAGCTTCTCTTTGTCTATATACTTTTCTTCAAGCCCTTCTCAATATCATTCGCAATAAGAAGCTACCTCCAAGTCCTCCTACCATACCCATCTTAGGCAACATTTTCTGGCTGCTCAAGTCCTCAAAAAACTTCGCTGACCTTGAGCCTGTCCTTCGCTATTTGCGCTCTAAGTATGGCAATATTGTCACCATCCACATTGGGTCTAACCCAGCCATTTTCATTACAACCCCCGAAGCAGCCCATCGAGCCCTTGTAAAAAATGGCACTGTCTTTGCTGGTCGCCCTTGGGCTCTCCAAACCACCAGAGTTTTCTTCCCTAACCAGCACACTGTTAGTACTTCGCCTTATGGTTCCATTTGGAGGCTCTTGCGTCAAAACCTAATGCAAGTGATCCAACCTTCTCGGTTAAAATCATATTCTCATTGCCGTAAGTGGGCATTGAATGTGTTCAAGAAACATATTTTAGCTGATATTGAATCGGGCAATAAGGCCGTACCAGTTTATGACCATTTTTCTCTTTCATTGTCTGTTTTGATATCTTATATTTGTTTTGGGGAGAAATTTGATGAGGAAACCGTCAGAGAAATTCAAAGGGTACAGCATAGTGTGATTCACAATTTCATTAGGTTCAATGTGCTGAATTTCCTGCCAATCTTGTCCAAGATTGTCTTCAGAAAGCTATGGAGGGAGCTTCTGGGCATTCGTCATAGACAAGTGAGTGTGGTCCTCCCAATCATAAAAGCTCGCCATGAGGAAATGAAAAGTAAGGTGGGGGATAAAGATGAAGAAGAAGAAGAAGATTTTGTGGCTTATGTTGATACCCTTTTTGATCTGAAACTCCCTGATAGTGGAAGGAAGCTGACAGATGAAGAATTAGTGAGTTTGTGTTCTGAGTTTATAATTGGTGGCACAGACACAACAGCTACCACATGGTTATGGGTCATGGCCAATTTGGTGAAGTACCAAGACATACAAGAGAAACTGTTAAATGAAATTAACAAAGTTGTGAAACCAGGTGAAGACATTGAAGAGGAGCATTTGAAAAGGATGCCTTATTTAAAGGCTGTGGTGTTGGAGACCGTTCGGCGACACCCGCCAGCACACTTTATACTGCCTAGGACAGTCACCAAGGATGCTGTAATGGATGGCTATTTTATACCCAAAGATGCAATGGTGAATTTTCTTGTGGCTGAAATAGGGTGGGATCCAAATTTGTGGGAAGACCCAATGGAGTTTAAGCCTGAAAGGTTTTTGAGGGATGGTGAAGAAGACGCAAAATTTGACTTGAAAGGGTTTACAGAGATCAAAATGATGCCTTTCGGTGCAGGAAGGAGAGTTTGCCCTGCAATTAGTATGGCACTGTTTCACCTTGAGTACTTTGTGGCCAATTTGATAAGGGATTTTAAGTTGACACTAGAAGATGGGTGTGAGGTTGACATGAGTGAGAAGCAGGACTTCACTATTGTGATGAAGAATCCTGTGAGGCCATGTGTATCTCCAAGAGCCATTTAA 1617 0.4224 MIHHPQVVQREQRSKNKKEFQLLTPPLMGLWIYLLASLCLYTFLQALLNIIRNKKLPPSPPTIPILGNIFWLLKSSKNFADLEPVLRYLRSKYGNIVTIHIGSNPAIFITTPEAAHRALVKNGTVFAGRPWALQTTRVFFPNQHTVSTSPYGSIWRLLRQNLMQVIQPSRLKSYSHCRKWALNVFKKHILADIESGNKAVPVYDHFSLSLSVLISYICFGEKFDEETVREIQRVQHSVIHNFIRFNVLNFLPILSKIVFRKLWRELLGIRHRQVSVVLPIIKARHEEMKSKVGDKDEEEEEDFVAYVDTLFDLKLPDSGRKLTDEELVSLCSEFIIGGTDTTATTWLWVMANLVKYQDIQEKLLNEINKVVKPGEDIEEEHLKRMPYLKAVVLETVRRHPPAHFILPRTVTKDAVMDGYFIPKDAMVNFLVAEIGWDPNLWEDPMEFKPERFLRDGEEDAKFDLKGFTEIKMMPFGAGRRVCPAISMALFHLEYFVANLIRDFKLTLEDGCEVDMSEKQDFTIVMKNPVRPCVSPRAI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1127 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Glsi05g1127 538 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 39 529 - -
Glsi05g1127 538 Pfam Cytochrome P450 57 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 FunFam Cytochrome P450 family protein 51 538 - -
Glsi05g1127 538 Gene3D Cytochrome P450 51 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 CDD CYP77_89 92 530 - -
Glsi05g1127 538 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 PRINTS E-class P450 group I signature 114 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1127 538 SUPERFAMILY Cytochrome P450 57 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1127 Glsi-ChrGlsi05 60995073 60996689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1127 28 536 Cytochrome P450 AT1G64940 44.208 3.49e-161 466