Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1107 ATGGGAATTATGGAGAGGTACAAGTTAATCAAGGAAGTTGGAGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAGACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAATGTGTAAACTTGAGAGAGGTCAAGTCATTACGGAAAATGAGTCACCCAAATATTGTGAAACTGAAGGAAGTTATTCGAGAAAGTGACATTTTATACTTCGTTTTTGAGTACATGGAGTACAACCTGTACCAACTCATGAAGGATAGGGGAAAGCTGTTTTCTGAAAGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATATTTTCATCGTGACCTGAAACCAGAAAACTTGCTGGTTACCAAGGATATTATCAAAGTTGCTGATTTTGGTCTTGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGAGCTCCTGAAGTGCTGCTTCAATCTTATATGTATAGTTCTGAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAATTGTTAACTCTCCGTCCTCTTTTTCCGGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGCAGTGTGATAGGCAGTCCAACCATGGAATCATGGGCTGATGGACTTAAGCTAGCGAGGGATATAAATTATCAGTTTCCACAGCTTGCTGGTGTACATCTTTCTGTTCTGATCCCTTCTGCAAGCACTGATGCAATCAGCCTTATAACATCACTTTGCTCATGGGATCCCTGCAAGAGGCCAACAGCTGCAGAGGCCCTTCAACATCCTTTCTTCCAGAGTTGCTTTTATATTCCTCCTTCCCTTCGCACCAAAGCTGTAGCGAGTACTCCTCCATCTGCTGGAGCAAGGGGAGCACCAGATAGGCATGGGTTTAAGAAATATTCTGGTCCTTTGTCTAATTCGAAGCTTACCAATAATTTTTCTTCCTCAAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGCAAGCTGGATATGGCAAGTGAGAAGGATGGAAACAAGACTGATAAGGCCTTGAAGACTATCAGACAACCAAAATATCGACCGCCAGGAAAGGACAGCCCAACTTCTATGAATAAGGGGAGGACTGCACGTGGGGTTTCAGAAACAGCTGATAAGTTGGCTAATATGAGTGTCGGTGGTACTCGAAGACAATCCATGGGGCAACCCCGACCCCCTCCAATGAAGGCAGGAATCCAATGGATTTCTGAATCTAGAAATTTCCTTTCGACTGGAAGAACTTACCCTAGAAAAGTCGCCGGATGA 1350 0.4348 MGIMERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRESDILYFVFEYMEYNLYQLMKDRGKLFSESEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKVADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYMYSSEVDMWAMGAIMAELLTLRPLFPGASEADEIYKICSVIGSPTMESWADGLKLARDINYQFPQLAGVHLSVLIPSASTDAISLITSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTKAVASTPPSAGARGAPDRHGFKKYSGPLSNSKLTNNFSSSKLHPPLASGVQRKLDMASEKDGNKTDKALKTIRQPKYRPPGKDSPTSMNKGRTARGVSETADKLANMSVGGTRRQSMGQPRPPPMKAGIQWISESRNFLSTGRTYPRKVAG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1107 449 ProSiteProfiles Protein kinase domain profile. 7 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1107 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Glsi05g1107 449 Gene3D Transferase(Phosphotransferase) domain 1 87 292 - -
Glsi05g1107 449 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Glsi05g1107 449 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 6 339 - -
Glsi05g1107 449 Pfam Protein kinase domain 7 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1107 449 MobiDBLite consensus disorder prediction 352 375 - -
Glsi05g1107 449 ProSitePatterns Protein kinases ATP-binding region signature. 13 37 IPR017441 GO:0005524
Glsi05g1107 449 SUPERFAMILY Protein kinase-like (PK-like) 3 290 IPR011009 -
Glsi05g1107 449 SMART serkin_6 7 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1107 449 MobiDBLite consensus disorder prediction 301 425 - -
Glsi05g1107 449 FunFam serine/threonine-protein kinase MAK isoform X1 87 296 - -
Glsi05g1107 449 FunFam cyclin-dependent kinase F-4-like 4 86 - -
Glsi05g1107 449 CDD STKc_MAK_like 7 286 - -
Glsi05g1107 449 MobiDBLite consensus disorder prediction 325 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1107 Glsi-ChrGlsi05 60880695 60885116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1107 4 293 Core Cell Cycle Gene Families AT3G48750 37.584 1.49e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Glsi05g1107 Pkinase 1.7e-75 CL0016