Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1106 ATGTTTACATGCATAGCATGTACGAAGCAAACGGCAGAGGACAGGGATGATGAAGAAGGAGGCGGCCGTGAGAGTGGCACGCCGAGTTCAAAAGAAGCCGTCAAAGGCCTGACGGCGCAGATAAAAGATATGGCACTCAAGTTTTCAGGTGCTTATAAGCAATGCAAACCCTGCACAGGGTCCAGTAGCTACAAGAGAGGGCAAAGACCTTATCCAGAATTTGATACCATCTCTGAAGGGGTTCCATACCCTTATATTGGAGGGGCAAGTTCAAGTTCAACACCTGCATGGGACTTTACAAGCTCCAATTACCCAGGTGGCAGATCCGACCCGAGATTTGCTGGGGAGATGACCCCTAGACGTGAGTCAGTCTATTCCCAATCTTGTGACGTAGTGTTAGAGGATGAGGATGAGCCCAAGGAGTGGATGGCGCAGGTGGAACCAGGTGTTCACATTACATTTGTGTCTCTTCCTAATGGAGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTATGATCGAATCATGGAGCTCTATAACGTCCAGAGATTCAACCGACAAGCTTTTCAAACTCCCTCAAGGTCTGAAGATGAGCCAAGAGATTCTACTTACACAAGAATAGGATCAGCATTAGAGAGCCCCATGGCCAAGGAGTGGACACCTAGGAGCCACTATAAGCCTTCAGGAAACAGAGGATATTACCCGTCTGACCCTTTCGATCATGGTGGTGGCGGCGGCCACCAATTCCATGCAGGGTCGTCCATGGAAGCACCGCGCCCAACAACCTCTTCATCTAGAGATGAACCTTCTGTTAGCAATGCCAGTGAGATGGAGACAGAATGGATAGAGGAAGATGAACCTGGGGTGTACATTACTATCCGACAGTTAGCTGATGGCACGAGGGAGCTCCGACGTGTCAGATTCAGCCGTGAAAGATTTGGGGAGGTAAATGCTAAGACATGGTGGGAGGAGAACAGAGAGAGAATACAAGCTCAGTACCTTTGA 1050 0.4867 MFTCIACTKQTAEDRDDEEGGGRESGTPSSKEAVKGLTAQIKDMALKFSGAYKQCKPCTGSSSYKRGQRPYPEFDTISEGVPYPYIGGASSSSTPAWDFTSSNYPGGRSDPRFAGEMTPRRESVYSQSCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQAFQTPSRSEDEPRDSTYTRIGSALESPMAKEWTPRSHYKPSGNRGYYPSDPFDHGGGGGHQFHAGSSMEAPRPTTSSSRDEPSVSNASEMETEWIEEDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1106 349 MobiDBLite consensus disorder prediction 8 35 - -
Glsi05g1106 349 ProSiteProfiles BRX domain profile. 294 349 IPR013591 -
Glsi05g1106 349 MobiDBLite consensus disorder prediction 228 294 - -
Glsi05g1106 349 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 349 IPR044532 -
Glsi05g1106 349 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
Glsi05g1106 349 Pfam Transcription factor regulating root and shoot growth via Pin3 293 348 IPR013591 -
Glsi05g1106 349 Pfam Transcription factor BRX N-terminal domain 25 58 IPR027988 -
Glsi05g1106 349 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
Glsi05g1106 349 MobiDBLite consensus disorder prediction 10 25 - -
Glsi05g1106 349 MobiDBLite consensus disorder prediction 270 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1106 Glsi-ChrGlsi05 60871094 60875473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1106 1 349 Major Intrinsic Protein MIP AT1G31880 67.787 5.46e-166 465