Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1104 ATGTCCAGGGCTGCTTCCAGCTCTCGTTTGAGGATGGAACAAATACAAGGGAAAGGGAGGGGTCTGGTTGCAGCCCAGCACCTCAAGGCTGGTCAAATTGTCCTCAGAGAAACCCCTGTCATTATCTACTCTGCTTTTCCTCTCATCTCTGATTCTGAACCCTCTTACTGTGACCACTGCTTCAGAATCTTACCCCCAACACTAACAGACACTATTTCATGCCCTTCATGTTCCCACCATCGTTTCTGTAGCCAGAAATGCCTTTCCATTGCCCTCAAATCCTCCCATTCTTCCTGGGCATGCCAAGTATTGTCTCGCCTGCGAGACTCTGGCTCAGTACTACTCGAACAACCCCCTGAGCTTCAAGTCCAAGCTCGTTTCGTTGTGGCTGCCAATAACCTTGCCCTTCTTTCCCCTTCTAATCTGCAGAGTTTGCTTTCTCTTCTGGGTAACCCAGATGCTGCCATTGTTACTGCTGCACAGTTCCTGCATTCTCTGCTCGCTTCTCTCTGCCCACCCCAGAACCAGCTCTCAGTAGAAGTTACGGCACAACTTCTGGCCAAAGACAGGCTCAATTCCTTTTGCTTGATGGAGCCTTATTCCCCAGATGGTCCCCAGAGATCTATCAAAGCATATGCAATTTACCCAAAAGCCACTTTCTTTAATCACGACTGTCTTCCTAATGCCTGCAGATTCGATTATGTAGATACTAGTGCTCCAGGAGACGAACACAACACTGACATTATCATCAGGACGATCCAGGATGTTCCTCAGGGTAAAGAAATCTGCATAAGCTATTTCCGAATCAACAAGGATTATTCTACCAGGAAGAAGATTTTGATGGAAGATTATGGGTTTACTTGTTACTGTGATAGGTGCAAGATTGAAGTAAATTGGCATGATGACCAAAATAATGGACAGAATAACAATTTCCCTCACGCGAGCATCCTTTCGAAATTCGTTTGTGATAGAAAGAACTGCTCGGGCACACTGGCTCCTCTGCCTCCAAAGGATGATACGCCATCTAATGTTCTGGAATGTAATTTCTGTGGCAACTTGAAAACTGATATTGCATAG 1077 0.4596 MSRAASSSRLRMEQIQGKGRGLVAAQHLKAGQIVLRETPVIIYSAFPLISDSEPSYCDHCFRILPPTLTDTISCPSCSHHRFCSQKCLSIALKSSHSSWACQVLSRLRDSGSVLLEQPPELQVQARFVVAANNLALLSPSNLQSLLSLLGNPDAAIVTAAQFLHSLLASLCPPQNQLSVEVTAQLLAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPKATFFNHDCLPNACRFDYVDTSAPGDEHNTDIIIRTIQDVPQGKEICISYFRINKDYSTRKKILMEDYGFTCYCDRCKIEVNWHDDQNNGQNNNFPHASILSKFVCDRKNCSGTLAPLPPKDDTPSNVLECNFCGNLKTDIA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1104 358 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 302 356 IPR044238 -
Glsi05g1104 358 Gene3D - 116 193 - -
Glsi05g1104 358 ProSiteProfiles SET domain profile. 8 267 IPR001214 GO:0005515
Glsi05g1104 358 Gene3D - 56 110 - -
Glsi05g1104 358 Coils Coil 357 358 - -
Glsi05g1104 358 CDD SET_SMYD 191 293 - -
Glsi05g1104 358 Gene3D SET domain 21 294 IPR046341 -
Glsi05g1104 358 Pfam SET domain 19 266 IPR001214 GO:0005515
Glsi05g1104 358 SUPERFAMILY SET domain 9 294 IPR046341 -
Glsi05g1104 358 SMART set_7 8 273 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1104 Glsi-ChrGlsi05 60862705 60863781 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi05g1104 SET 2.7e-12 No_clan