Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1092 ATGGATAAGGATCGCAATTTCAGTTTCTATCCCTTCTCTGTTTGTGTCTATCATATTCATTATCTTCCGTTTGAGGAGGATGAGAAAAGCCAACCATGTGATGTGTACATGGTCTTCATATTCCCTGATGATTATTCTATATGTTTGTCTTTTGCAAATATTTTGAACCGACTAATTCCTACAATATGCCTTTTCTATCAATTGAAATTTGAAGATTCATTCAAAAGGGGTGTGTTAGATTGGAGAAAACGAGTGATCATCATTGAAGGGATTTCACAAGGACTTCTTTACCTTCATCAGCACTCAAGGTTAAGAATCATACACAGGGATTTGAAAGCTAGTAACATATTACTTGATGTAGACATGTATCCTAAAATTTCTGACTTTGGCATGGCGAGAATTTTCAAACGTAACGAATATATTGCTAATACTAATAGAATTGTTGAGACTTATGGATACATGTCTCCTGAATATGCAATGGAAGTTATATTTTCTATAAAATCAGATGTCTTTAGTTTTGAAGTCTTGATCCTTGAAATTTTAAGTGGCAAGAGGAGGAACAGCTTTTATGATGTCAATGGACCTTTGAAACTAGTAGGATATGCTTGGGTGTTGTGGCAGAGGGGTGCTTGGTTAGAGCTAATGGATCCGACACTAGGTGATTCTTGTTCAACCCAGCAATTTCTCAGATTTATTCAAGTGGGCCTTTTGTGCGTGGAAGATTCTCCAGCAGATAGACCAACTATCTCAGAAGTCATTTCTATGATCACAAATGAAAGCACCCATTTACCTACGGTGAAGAAACCTGCATATACGAATTTGGACAGTATCACCAGTGCAGATTCTCAGAGGAATGATTTAGAATACCATTCATTGAATGTCGTGTCTATCTCCACTATGAATGCAAGATAA 912 0.3673 MDKDRNFSFYPFSVCVYHIHYLPFEEDEKSQPCDVYMVFIFPDDYSICLSFANILNRLIPTICLFYQLKFEDSFKRGVLDWRKRVIIIEGISQGLLYLHQHSRLRIIHRDLKASNILLDVDMYPKISDFGMARIFKRNEYIANTNRIVETYGYMSPEYAMEVIFSIKSDVFSFEVLILEILSGKRRNSFYDVNGPLKLVGYAWVLWQRGAWLELMDPTLGDSCSTQQFLRFIQVGLLCVEDSPADRPTISEVISMITNESTHLPTVKKPAYTNLDSITSADSQRNDLEYHSLNVVSISTMNAR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1092 303 SUPERFAMILY Protein kinase-like (PK-like) 64 276 IPR011009 -
Glsi05g1092 303 Gene3D Transferase(Phosphotransferase) domain 1 67 275 - -
Glsi05g1092 303 SMART serkin_6 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1092 303 ProSiteProfiles Protein kinase domain profile. 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1092 303 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 302 - -
Glsi05g1092 303 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 63 264 - -
Glsi05g1092 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Glsi05g1092 303 Pfam Protein tyrosine and serine/threonine kinase 77 253 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1092 Glsi-ChrGlsi05 60788201 60789964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1092 72 297 Receptor kinase-like Gene Family AT4G11530 51.982 1.42e-73 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi05g1092 PK_Tyr_Ser-Thr 2.6e-23 CL0016