Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1078 ATGGCGGAAAGTCCAGTGTTGTTTCTACTGGACAAGCTGACTTCTCTACTACAAGAAGAAGTGCAGCTGCTGAAAGGGGTCCGCACAGAGGTCCAATTCATCAAAGATGAACTGGAGCGTCTCCAGGCCATCTTAAGGGTGGCTGATGCTTTGGAAGACACAGACCCTGAACTCAAAGTGTGGGTCAAACAAGTGAGAGATGTTGCTCATGACATGGAAGATGCTATTGATGACTTCACTCTTCGCCTTGTGGATCGTCGTGGGCATGGCCACAATTCTTCTCTACGCAAGTTTGCCTCCACCATAAAGGCTCTCAGAGCTCGGCATCAGATTGCCTTAGATATTCAAAAGATCAAAGGCAGAGTGGAAACCATCTCCAAGGGTCGTCGCAGCATAACTGAGACGGGCTCAAGCCCAAGCCCTACGTATACATCAAGTCTTGATAGTCAAGGAGATGCACTTCTGCTAGAGGAAGCTGATCTTGTGGGTATTGACAAGCCCAAAAAGCAGATAATTGAGTTCCTTTTCAAAGAGGAACCTGGAAGGGTGGTTATTCCCATTTGTGGAATGGGAGGATTGGGGAAAACCACATTGGCAAAGCAGGTCTATGAGGACCCCAGAGTGAAGAAACGTTTCAGGATGCACGCTTGGGTCACTGTTTCCCAATCTTTCAAAATAACTGAGCTCCTAAGAGACCTGGTTCAACAGATCTATAATGTCATTGGCAAACCAGCTCCAGAAGCAGTTGGCACAATGAAAAGTGACAAGCTAAAAGAGGTGATCAAGAATTTGCTTCAGCAAAGCAGGTATCTCATTGTCCTGGATGATGTATGGCGGGTAGGTGCCTGGGATGCTGTCAAGTATGCTTTGCCCAATAACAATTATGGCAGTAGAGTAGTGCTTACCACACGCAATAAAGAAGTAGCCTCTTCTTCCTGCACCGAATTGCATGGTAAGGTCTATAACCTGGAATTCTTACCTCAGCAAGAAGCATGGTCTCTTTTCTGTAAGAAGACCTTTCAAGGGAATTCATGCCCTCCTCATTTGGAGGAGTCTTGCCAGTGTATCTTAAAAAGGTGTGGGGGATTGCCTCTAGCAATTGTGGCAATCAGTGGTGCTTTGGCTACAAAAGACAAGGCAAACATAGAAGAATGGCAGATTGTTTGCAAAAGGTTTGTGTCTGAAATTGAAGGTAATGACAAACTGGAGGATATGAAGAAAGTGCTTTTTCTAAGTTTCAATGACTTACCTTACTATCTTAAATCCTGTTTGTTGTACCTAAGCATCTTTCCGGAGTTCTATGCTATTGAGCATATGAGGCTGATTCGATTGTGGATAGCTGAAGGATTTGTTCATGGAGAAGAAGGAAAGATACCGGAAGAAGTTGCAGAGAGTTACCTCCAGGAGCTCTTAAACAGGAGTCTGATGCAAGTAGTAGAGAAAAGCAGTGATGGCAGAATGAAGACTTGTCGCGTCCACGACCTTCTACGAGAGATCATCAATTTGAAGTCAAGAGATCAGAACTTTGCAACAATAGCCAAAGAACAGGACATAATCTGGCCAGAAAGAGTTCGGCGCCTATCAGTGATAAACTCTTTACAGCACATACAGCAAAATAGGACCACATTCCAACTACGTTCTCTACTATTGTTTGCTTTATCAGATTCACTTGATCATTTTCCCATTTCTGCATTATTTTCAAATGGTTGTAGGCTACTTAAAGTGCTAGATTTGCAGGATGCACCTTTGGAGTTGTTTCCTGCTGAAATTGTCAACCTTTACCATCTGAGGTATCTAAGCTTGAAGAATACAAAGGTGGAAAACATTCCAGGTTCCATTAAGAAGCTTCAAAACCTGGAAACATTAGATCTTAAACATTCCTATGTCACTGAATTGCCAGTTGAAATCTTGGAGCTGCATCGGCTACGCCATCTCCTGGTGTATCGCTATGAGATTGAATCCTATGCTCATTTCCACTCAAGGCATGGTTTCAAGTTGTCGGCGCCAATAGGATCTATGCAATCCCTGCAAAAGCTTTGCTTTATAGAGGCAGACCAAGAAAGTCAAGACATGATGATTGAGCTAGGAAAACTGACCCAACTTAGGAGGCTGGGCATTATAAAGATGAGGCAAGAGGAAGGGGCTGCTTTGTGCTCATCCATTCAGAAGATGACCAATCTCCGGTCTCTGTCCATAACTTCAATAGAAGATGATGAGATCATTGATATTCAAAACATTTCCAAGCCTCCTCAATATCTTCAACGATTGTACTTATGTGGACGTCTAGAGAAGTTACCTGAATGGATACCTTCCCTCCAGAATTTGGCCAGAGTGTATCTAAAATGGAGCAGGTTACAGGAGGACCCCCTGGCATATCTTCAAGATTTGCCCAATCTAATACATCTTGAGTTTCTTCAGGTTTATGTTGGTGAGACATTGCACTTCAAGGCAAAGGGATTTCCAAGTCTGAAGCTTTTAGGCCTTGATGACTTAGATGGACTGAAAACTATGATAGTGGAAGAGGAAGCAATGCCTGGTCTGAAAAGGCTGATCATCCAGCGCTGTCAATCGTTGAAGAAGGTTCCCTCAGGCATTGAACACCTAACTAAGCTAAAAGCAATTGAGTTCTTTGATATGCCTGATGAATTGATAATGGCACTGCGTCCAAATGGCGGTGAAGATTATTGGAGAGTAGAACACGTCCCAGTAGTTTATTCAAATTATTGGAGGTCTGGTGGTTGGGATGTCTTATCATTGGAGACTTTTGGGGAAAGAGAGAGTTCTTCCAGTCTTAATGCTGCAATGAGAAGCCATGAACTTCGTACTCTCTGGAAGGTTTAA 2841 0.434 MAESPVLFLLDKLTSLLQEEVQLLKGVRTEVQFIKDELERLQAILRVADALEDTDPELKVWVKQVRDVAHDMEDAIDDFTLRLVDRRGHGHNSSLRKFASTIKALRARHQIALDIQKIKGRVETISKGRRSITETGSSPSPTYTSSLDSQGDALLLEEADLVGIDKPKKQIIEFLFKEEPGRVVIPICGMGGLGKTTLAKQVYEDPRVKKRFRMHAWVTVSQSFKITELLRDLVQQIYNVIGKPAPEAVGTMKSDKLKEVIKNLLQQSRYLIVLDDVWRVGAWDAVKYALPNNNYGSRVVLTTRNKEVASSSCTELHGKVYNLEFLPQQEAWSLFCKKTFQGNSCPPHLEESCQCILKRCGGLPLAIVAISGALATKDKANIEEWQIVCKRFVSEIEGNDKLEDMKKVLFLSFNDLPYYLKSCLLYLSIFPEFYAIEHMRLIRLWIAEGFVHGEEGKIPEEVAESYLQELLNRSLMQVVEKSSDGRMKTCRVHDLLREIINLKSRDQNFATIAKEQDIIWPERVRRLSVINSLQHIQQNRTTFQLRSLLLFALSDSLDHFPISALFSNGCRLLKVLDLQDAPLELFPAEIVNLYHLRYLSLKNTKVENIPGSIKKLQNLETLDLKHSYVTELPVEILELHRLRHLLVYRYEIESYAHFHSRHGFKLSAPIGSMQSLQKLCFIEADQESQDMMIELGKLTQLRRLGIIKMRQEEGAALCSSIQKMTNLRSLSITSIEDDEIIDIQNISKPPQYLQRLYLCGRLEKLPEWIPSLQNLARVYLKWSRLQEDPLAYLQDLPNLIHLEFLQVYVGETLHFKAKGFPSLKLLGLDDLDGLKTMIVEEEAMPGLKRLIIQRCQSLKKVPSGIEHLTKLKAIEFFDMPDELIMALRPNGGEDYWRVEHVPVVYSNYWRSGGWDVLSLETFGERESSSSLNAAMRSHELRTLWKV 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1078 946 Gene3D - 326 412 IPR042197 -
Glsi05g1078 946 FunFam Probable disease resistance protein At1g63360 413 502 - -
Glsi05g1078 946 Pfam NB-ARC domain 166 414 IPR002182 GO:0043531
Glsi05g1078 946 MobiDBLite consensus disorder prediction 129 147 - -
Glsi05g1078 946 Gene3D - 413 502 IPR036388 -
Glsi05g1078 946 MobiDBLite consensus disorder prediction 126 147 - -
Glsi05g1078 946 SUPERFAMILY L domain-like 491 881 - -
Glsi05g1078 946 Coils Coil 24 54 - -
Glsi05g1078 946 Gene3D - 153 316 IPR027417 -
Glsi05g1078 946 PANTHER DISEASE RESISTANCE PROTEIN RP 31 858 IPR044974 GO:0006952
Glsi05g1078 946 CDD RX-CC_like 2 127 IPR038005 -
Glsi05g1078 946 Pfam Rx N-terminal domain 7 93 IPR041118 -
Glsi05g1078 946 Gene3D - 6 112 - -
Glsi05g1078 946 PRINTS Disease resistance protein signature 184 199 - -
Glsi05g1078 946 PRINTS Disease resistance protein signature 614 630 - -
Glsi05g1078 946 PRINTS Disease resistance protein signature 264 278 - -
Glsi05g1078 946 PRINTS Disease resistance protein signature 360 374 - -
Glsi05g1078 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 427 IPR027417 -
Glsi05g1078 946 Gene3D Ribonuclease Inhibitor 503 888 IPR032675 -
Glsi05g1078 946 FunFam Probable disease resistance protein At1g61300 152 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1078 Glsi-ChrGlsi05 60600097 60602937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1078 172 627 WRKY Transcription Factor Family AT5G45050 21.206 4.29e-06 48.9