Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1066 ATGGGTTACGAGAACGATCCTTATCGCGACGAGGATGGAGAGCCATTGATGGATTACGATGACGGGCAATCCGATCGTGACCAATCTCCCGAACCCCATCAGCAAGGATTTCTCGACGATTTAGAGGAAGACGTTGATGATTCGCTTGGCCGAGATCGATCGCAGACGCCGGTCTACGATACCGATCCATCGATGTCGAAGTCGAAGCCAAGGAAGAGGCTTATCAAGAAGAGTGACTCTGGGAAGCAGTCTTTGGCCCCGGAACTTGTTGATGATGAGGAGGAGGAAGATAATGTTCCCGCGAATTTTGTGAGGGACGGGTCTGAGGAGGGGGAAGGAAGAAAGAGGAAGAAGGGGAAGGATGGTGGTAGTGGGAAGAAGGAGACGAGGCAGAAGGGGGGAAGCAAGTTTGGAAGCAGTGGTAAAATCGGCTCAAAATTTGGGCTTTCGAAGAAAGGGTTTGCAGGGAAGGCGGGAAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATCGCCGGAGGGGATTCGGAGGATGATCAAGAGGGTGCCAGGACTGTAGATGATGATAACTTTATCGATGACAGTGGAGTGGAACCTGCTTTATATGGTAACGACCATGAACCGCATTCTCCTGGTGAAGCTCCCCAGGCAGAGGAAGGTGAAGATGATGAAGAAATTAATGAGCTTTTCAAGATGGGTAAGAAAAAGAAGAAGAATGAGAGAAGTCCTGCAGAAATAGCTTTGTTAGTTGAGAATGTCATGGCCGAGCTTGAGGTTACAGCCGAAGAGGATGCTGAACTTAATAGACAGGGGAAGCCTGCCATTAATAAACTCAAGAAGTTGCCTCTTCTTACAGAAGTCCTCTCCAAGAAACAGCTTCAACTAGAGTTTCTAGATCATGGAGTGCTCACTTTACTAAAGAATTGGCTTGAACCACTCCCAGATGGAAGCTTACCAAATATAAACATTCGCACTGCAATTTTGAATATTTTGAATGATTTCCCCTTAGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTGGGAAAGGTAATTATGTTTTTGTCAAAATCCGATGAAGAAATCGGTGTAAATAGGAAGCTAGCAAAGGAGTTGGTTGATAAATGGAGCCGACCTATATTTAATAAGAGTACCAGGTTTGAAGACATGAGAAATATTGATGATGATAGGGTTCCTTTTAGGAGACCATCAGTTAAAAAGCCGGCAAATAAAGCTGCGGGAATGGTATCCAGAGACGGTGATCTTGATATAGAATTTTCACAGCCTAAGTCTGGACAATCCTCTTCCAGGCAACTTACAACAAGGCCAGAGGCAACTCCATTGGATTTTGTTGTGCGTCCCCCATCTAAAGTTGATCCAGAAGAAGTTAGAGCCCGCGCAAAACAAGCTGCACAAGATCAGCATCGTATGAAGATGAATAAAAAATTACAGCAGTTGAGGGCACCAAAAAAGAGGCAGCTTCAAGCCGCAAAAGTGAGTGTTGAAGGTCGGGGAATGCTCAAATATTTGTAG 1551 0.4545 MGYENDPYRDEDGEPLMDYDDGQSDRDQSPEPHQQGFLDDLEEDVDDSLGRDRSQTPVYDTDPSMSKSKPRKRLIKKSDSGKQSLAPELVDDEEEEDNVPANFVRDGSEEGEGRKRKKGKDGGSGKKETRQKGGSKFGSSGKIGSKFGLSKKGFAGKAGKDHDGDVKEMWDTIAGGDSEDDQEGARTVDDDNFIDDSGVEPALYGNDHEPHSPGEAPQAEEGEDDEEINELFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPLDLEQYDRREQLKKSGLGKVIMFLSKSDEEIGVNRKLAKELVDKWSRPIFNKSTRFEDMRNIDDDRVPFRRPSVKKPANKAAGMVSRDGDLDIEFSQPKSGQSSSRQLTTRPEATPLDFVVRPPSKVDPEEVRARAKQAAQDQHRMKMNKKLQQLRAPKKRQLQAAKVSVEGRGMLKYL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1066 516 Coils Coil 252 272 - -
Glsi05g1066 516 MobiDBLite consensus disorder prediction 155 193 - -
Glsi05g1066 516 MobiDBLite consensus disorder prediction 19 39 - -
Glsi05g1066 516 Pfam TFIIS helical bundle-like domain 340 386 IPR017923 -
Glsi05g1066 516 MobiDBLite consensus disorder prediction 433 449 - -
Glsi05g1066 516 MobiDBLite consensus disorder prediction 100 133 - -
Glsi05g1066 516 MobiDBLite consensus disorder prediction 461 486 - -
Glsi05g1066 516 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 245 392 IPR035441 -
Glsi05g1066 516 ProSiteProfiles TFIIS N-terminal domain profile. 306 389 IPR017923 -
Glsi05g1066 516 MobiDBLite consensus disorder prediction 405 503 - -
Glsi05g1066 516 MobiDBLite consensus disorder prediction 1 226 - -
Glsi05g1066 516 PANTHER PROTEIN IWS1 HOMOLOG 1 1 516 IPR044204 GO:0009742|GO:0032784
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1066 Glsi-ChrGlsi05 60501734 60510671 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Glsi05g1066 Med26 1.1e-12 No_clan