Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1065 ATGGGTAGCAGTGAGATGGATAAAACCCCAAAAGAGAAGGAGTCAAAGACACCTCCTACATCACAGGAACAGTCTTCAACCACCGGCACTGGAACAATTAATCCTGACTGGTCCAGCTTTCAGGCATATTCTCCTATACCTCCACATGGGTTCTTGGCATCAAGTCCTCAGGCCCACCCATATATGTGGGGTGTCCAGCACATTATGCCTCCTTATGGTACCCCGCCGCATCCCTATGTTGCAATGTATCCCCCTGGTGGCATATATGCTCATCCATCTATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTTCCATGCCTTCTCCAAATGGCATTGCTGAGGCTTCAGGAAATACTCTTGGCGGCATGGAAGCTGATGGTAAGCCTCCTGAGATGAAGGAAAAATTGCCTATTAAAAGATCCAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAGAATATTGAACTTAGTAAAACACCAGGAACATCTGCTAATGGAGTTCATTCAAAAAGTGGCGAGAGTGCAAGTGAAGATACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGACTCACAGTTGAAATCAGGGGGAAGGCAAGATTCTTTAGAAGATGAACCATCTCAAAATGGCAGTTCCGTACATGCTCCTCAAAATGGGGGACTTAATACACCTCATACAATGGTTAATCAAACTGTGCCTATCATGCCTATCTCCGCTGCTACTCCTGGAGGAGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGGACACCGACTTCATCCACTATCCCTGTGCTGCACGGAAAGGTTCCCTCTACTGCTGTTGCTGGAGGGATGGTTACTGCTGGATCACGGGAGGGTGTTCAATCACAACTTTGGCTGCAGGATGAAAGAGAGCTAAAGAGACAGAGGCGGAAACAGTCTAATAGGGAATCTGCTCGCAGATCCAGATTGCGCAAGCAGGCCGAATGTGATGAACTATCCCAGCGTGCTGATGCTCTGAAGGAAGAAAATGCTTCTCTCCGGTCAGAAGTAAGTCGGATCAGGAGTGAGTATGAACAGCTGCTCTCAGAAAATGCCGTCCTTAAGGAGAGACTTGGTGAATTACCTGGGAACGAGGATCTTAGGTCTAGCCAGAATGACCAACATGTGGCTAATGAGACACAACAGACTGGGCAGACAGAAGCTGTGCAGGGTGGCCATTAG 1224 0.4681 MGSSEMDKTPKEKESKTPPTSQEQSSTTGTGTINPDWSSFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFSMPSPNGIAEASGNTLGGMEADGKPPEMKEKLPIKRSKGSLGSLNMITGKNIELSKTPGTSANGVHSKSGESASEDTSEGSDANSQNDSQLKSGGRQDSLEDEPSQNGSSVHAPQNGGLNTPHTMVNQTVPIMPISAATPGGVPGPTTNLNIGMDYWGTPTSSTIPVLHGKVPSTAVAGGMVTAGSREGVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRADALKEENASLRSEVSRIRSEYEQLLSENAVLKERLGELPGNEDLRSSQNDQHVANETQQTGQTEAVQGGH 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1065 407 SMART brlzneu 303 367 IPR004827 GO:0003700|GO:0006355
Glsi05g1065 407 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 398 IPR044827 GO:0003700|GO:0006355|GO:0043565
Glsi05g1065 407 Pfam bZIP transcription factor 303 365 IPR004827 GO:0003700|GO:0006355
Glsi05g1065 407 MobiDBLite consensus disorder prediction 379 407 - -
Glsi05g1065 407 Pfam Disordered region downstream of MFMR 134 270 - -
Glsi05g1065 407 MobiDBLite consensus disorder prediction 19 41 - -
Glsi05g1065 407 Coils Coil 316 371 - -
Glsi05g1065 407 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 305 368 IPR004827 GO:0003700|GO:0006355
Glsi05g1065 407 MobiDBLite consensus disorder prediction 1 41 - -
Glsi05g1065 407 MobiDBLite consensus disorder prediction 373 407 - -
Glsi05g1065 407 MobiDBLite consensus disorder prediction 120 229 - -
Glsi05g1065 407 MobiDBLite consensus disorder prediction 305 324 - -
Glsi05g1065 407 CDD bZIP_plant_GBF1 308 358 IPR045314 GO:0003700|GO:0006355
Glsi05g1065 407 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 310 325 IPR004827 GO:0003700|GO:0006355
Glsi05g1065 407 Gene3D - 306 360 - -
Glsi05g1065 407 MobiDBLite consensus disorder prediction 1 18 - -
Glsi05g1065 407 Pfam G-box binding protein MFMR 1 95 IPR012900 -
Glsi05g1065 407 MobiDBLite consensus disorder prediction 145 229 - -
Glsi05g1065 407 SUPERFAMILY Leucine zipper domain 306 362 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1065 Glsi-ChrGlsi05 60491149 60500422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1065 1 401 bZIP Transcription Factor Family AT2G35530 64.059 5.60e-174 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi05g1065 MFMR_assoc 4.8e-58 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1065 05 60491149 60500422 Glsi05g1065 05 60491149 60500422 ECH