Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1035 ATGGCACCCTCATTCCTTCCAAATTCAAACACAGTCTGTGTGATGGACGCTTCGGGCCACCTGGGCGTCACTCTGGTACAGCGGCTCCTCCAAAGGGGCTACACCGTCCATGCCTCCGTTCAACAGCATGTCGAAGAGCAATTCCACGGGCTTCCTGCCGAACCCGATAAGCTCAAGATTTTCCGTTCAGACCCATTTGATTACCATAGCATAATCGACGCACTCAAAGGCTGCTCTGGCTTGTTCTACACTTTTGAACCTCCTCAAGATCAACCCGACTATGATGAATACATGGCGGATGTGGAGGTGAGAGCAGCACACAACGTGCTCGAAGCTTGTGCTCAAACTGAAACCATGGATAAAGTGGTTTTCACATCCTCGGCCACCGCAGTGGTTTGGAGGGAGGATCGCAAGTCCCTTGAATTAGACTTGGACGAGAGGCACTGGAGCGATGTTAATTTATGTCGTAAGTTTAAGTTATGGCATGGCATGTCAAAGACGCTATCGGAGAAGACAGCGTGGGCGTTGGCAATGGACCGTGGTGTTAATATGGTGTCCGTCAACTCTGGCTTGTTGATGAATCATGATCTATCCATCAAGAACCCCTATTTGAGAGGAGCTGCTGAGATGTACGAGGACGGGGTGTTCGTGACCGTTGATTTGGACTTCTTGGTGGACGCCCACGTTTGCGTCTACGAAGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCATATCATCAACACCCAGGACGACGCCGTTGAACTTGCCCGCAAGTTGACCCCGTCTGCACCTTCAATGCCCCAAAGCCATGAGCAGGGTAAAAGTTTTATTGAACAAAGAATAAGCAACAAGAAGTTGAACAAATTGATGGTGGATTTTGAGGGTTGA 894 0.4922 MAPSFLPNSNTVCVMDASGHLGVTLVQRLLQRGYTVHASVQQHVEEQFHGLPAEPDKLKIFRSDPFDYHSIIDALKGCSGLFYTFEPPQDQPDYDEYMADVEVRAAHNVLEACAQTETMDKVVFTSSATAVVWREDRKSLELDLDERHWSDVNLCRKFKLWHGMSKTLSEKTAWALAMDRGVNMVSVNSGLLMNHDLSIKNPYLRGAAEMYEDGVFVTVDLDFLVDAHVCVYEDVSSYGRYLCFNHIINTQDDAVELARKLTPSAPSMPQSHEQGKSFIEQRISNKKLNKLMVDFEG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1035 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 266 IPR036291 -
Glsi05g1035 297 Gene3D - 6 297 - -
Glsi05g1035 297 CDD FR_SDR_e 12 293 - -
Glsi05g1035 297 Pfam NAD(P)H-binding 17 131 IPR016040 -
Glsi05g1035 297 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 297 - -
Glsi05g1035 297 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1035 Glsi-ChrGlsi05 60232766 60234785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1035 11 295 Monolignol Biosynthesis Gene Families AT5G58490 32.787 5.19e-42 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1035 05 60232766 60234785 Glsi05g1035 05 60232766 60234785 ECH