Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1009 ATGTTTTTCTTTTGTCCGTGGCAGAGGACGTTTAAAGTTCTTGTCTCCATTGTTGTTTCTTTTTTTTAAATCCCATCTCAGAGCTTCACCTTAAGCCTCGAACTTTGTAAGCTTTTTATACTTAATCATCAGCAGAAAAGTGACCGGACAGTGGGCCCATCCCTCATTTCAACCTCATACTTTTCTACCTTTCAGAAGTGTGTTCCAAAGCTACAAAGGATACGAAAAAAGATGGGCGATGTGGCTAAGGACCTTACTGCTGGAACAATTGGAGGGGCAGCACAACTGATATGTGGACACCCGTTTGACACCATTAAGGTCAAGCTCCAAAGTCAACCTACACCGCTCCCTGGCCAACCTCCCAAATATTCTGGTGCAATTGATGCTGTAAAGAAAACATTAGCAGCTGAAGGCCCCAGGGGCTTATACAAAGGTATGGGTGCACCACTTGCCACAGTAGCAGCCTTCAATGCTGTCCTGTTTTCAGTGAGGGGACAAATGGAGGCGTTACTGAGATCCCATCCCGGTGCCCCGCTTACAGTTAAACAGCAGTTTGTTTGTGGAGCTGGGGCTGGTTTTGTTGTTTCCCTTCTCGCTTGCCCCACTGAACTCGTCAAATGCAGGTTGCAAGCACAAAGTGTGGTTGCCCATTCGGGAACAGCTGCTGTTGCTGTCAAGTATGGAGGACCCATGGATGTGGTAAGGCAAGTTCTGAGGTCAGAAGGGGGTATGAAAGGTCTATTCAAGGGCTTGGTTCCTACTATGGCACGTGAAGTACCTGGAAATGCTATTATGTTTGGGGTATATGAAGCAACAAAGCAATTATTTGCAGGGGGTTCGGATACATCTGGGCTGGGGAGAGGTTCCTTGATTATTGCTGGAGGCTTGGCTGGAGGCTCCGTGTGGTTCTTGGTTTACCCAACTGATGTTGTTAAGAGTGTGATTCAAGTAGATAATCACAACAATCCAAAGTTTTCTGGTTCCATTGATGCTTTTAGAAAGATTCGAGCTTCGGAGGGGTTGAAAGGCCTGTATAAGGGTTTTGGTCCAGCAATAGCCCGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGGATGA 1125 0.4658 MFFFCPWQRTFKVLVSIVVSFFXIPSQSFTLSLELCKLFILNHQQKSDRTVGPSLISTSYFSTFQKCVPKLQRIRKKMGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPTPLPGQPPKYSGAIDAVKKTLAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQMEALLRSHPGAPLTVKQQFVCGAGAGFVVSLLACPTELVKCRLQAQSVVAHSGTAAVAVKYGGPMDVVRQVLRSEGGMKGLFKGLVPTMAREVPGNAIMFGVYEATKQLFAGGSDTSGLGRGSLIIAGGLAGGSVWFLVYPTDVVKSVIQVDNHNNPKFSGSIDAFRKIRASEGLKGLYKGFGPAIARSVPANAACFLAYEMTRSALG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1009 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 79 170 IPR018108 -
Glsi05g1009 374 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 79 373 - -
Glsi05g1009 374 Pfam Mitochondrial carrier protein 180 277 IPR018108 -
Glsi05g1009 374 Pfam Mitochondrial carrier protein 81 172 IPR018108 -
Glsi05g1009 374 Pfam Mitochondrial carrier protein 291 373 IPR018108 -
Glsi05g1009 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 372 IPR018108 -
Glsi05g1009 374 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 80 373 - -
Glsi05g1009 374 SUPERFAMILY Mitochondrial carrier 77 367 IPR023395 -
Glsi05g1009 374 Gene3D Mitochondrial carrier domain 23 178 IPR023395 -
Glsi05g1009 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 179 275 IPR018108 -
Glsi05g1009 374 Gene3D Mitochondrial carrier domain 179 374 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1009 Glsi-ChrGlsi05 60097673 60102473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1009 99 368 Antiporters AT1G79900 33.818 4.80e-41 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1009 05 60097673 60102473 Glsi05g1009 05 60097673 60102473 ECH