Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0992 ATGGCTCAAGCCAATGGCCGTCGTGATGCTACTGTGATTGATATTAAGAGATCCACAAATTTTACAGGTGGGCTTGAGTTCTCAGACCTCACTTACACTGTGACAAAGAAGAAGGAGGTTGATGGGAACTGGCTGAATGAGGAGGTGGACTTGCTGCATCAAATTACTGGCTATGCACCAAAGGGTTGTGTCACTGCAGTGATGGGTCCTAGTGGTGCAGGAAAGTCCACTTTTTTGGATGGCCTTGCTGGGAAAATTGCTAGTGGGAGCCTTAAAGGGAGCGTCTTCTTGGATGGAATTGCTACGAGCCCAAGCTTGATCAAAAGAACTTCTGCATATATTATGCAGGATGATAGGCTATTTCCAATGCTCACTGTCTATGAGACTTTGATGTTTGCTGCTGATTTCCGGTTGGGTCCACTTTCAATTGCTGATAAGAAGCAGAGAGTAGAGAAGCTCATTGAGCAGCTTGGCTTATCATCAACTCGAAACACCTATATAGGAGATGAAGGGACTAGAGGAGTGTCTGGTGGAGAGAGACGCAGGGTGTCAATTGGTGTGGACATCATCCATGGACCATCTCTTCTGTTTCTGGACGAGCCGACTTCGGGTCTAGACTCCACTAGTGCTCTCAGCGTGATAGAAAAGGTGCATGACATTGCACGAAGTGGCAGCACCGTGGTTCTCACAATCCACCAGCCTTCATCCAGAATCCAATTGCTTCTTGATCATCTCATCATCTTGGCTAGAGGGCAGCTCATGTATCAAGGAGCACCCAAAGATGTTGGTCTCCATTTGAAACGCATGGGACGCAGAGTCCCCAAGGGAGAGAACCCAATTGAGAATCTCATTGATGTGATCCAAGAATATGATCAGTCTGAAGTTGGAGTTGGAGCACTAGCTGAGTTTGCACGTACAGGGGTGAAACCCCCTCCTTTGTCTGACCAGGAATTGTCCCTTTCAACCGTTGCACCATCAACTCCAGCTCCAAACCGTAGCCACCATGGACGTCATCAACGCCTTGGGGATGACGAAAAATCTGAAGAAATCTCTCACTCGCAAATAAGTAGGCGTATCGCAGATGATTTTGATCACAGCGTGAGAAGCACACATGGTATACCCAAGTCATGGAGTACCAGTAATAGTGCAGTGTTTCGAAAATTTACTCCTTCACGACCCAAGAATGACCAAAAGGTGCAGAATCCTGTAAGCAATTCTTCCCCTGGCTACTACACATACTCAAGCGAAATCCTCCCAGCCACTCCAACTCCCCACAGCAGCGACTACACTGTGAATGAGAACGACTACCTCACTCCCCCAACCGCCATGCCAAAAAATCTTGGCCCAAAATTTGCAAACTCCTTCTTCAAAGAGACTTGGATCCTCATGCGCCGAAACTTCATAAACATCCGGCGAACCCCTGAGCTTTTCCTCTCGAGACTAATGGTTCTCACTGTCATGGGCTTCATGATGGCCACCATGTTTAAGAACCCCAAACCAAACTTGCAAGGAATCACAAACCGTCTCAGCTTTTTCATCTTCACTGTGTGTCTCTTCTTCTTCTCTTCCAACGATGCCGTCCCTGCTTTCATCCAAGAGCGCTTCATTTTCATCAGGGAGACTTCCCATAATGCCTACAGGGCCTCCTCCTACACCATCGCTAGCCTAATCACCCACACTCCATTTCTTGCTCTGCAAGCTTTAGTCTACGCAGTCATTGTTTGGTTTGCTTTAAAGCTTGAAGGCCCTTTCCTGTACTTCTTTATTATTCTCTTCGTTTCCCTTGTTACAACCAACTCGTTTGTTGTTTTTGTGAGCTCAGTGGTCCCAAACTACATCTTGGGCTATGCTGCTGTCATTGCTTTCACTGCTCTCTTCTTCTTGTTTTGTGGGTATTTCTTGAGTAGCAAGGACATTCCATCCTACTGGCGTTGGATGAACAAAATTTCAACAATGACGTACCCTTATGAGGGGCTCTTGATGAACCAGTATCAGACAGAAGATGTGTTTGGAACAAACCTTGATGGATCACTCGTTACAGGTTTTGATATCCTGAAAGGTCTTCACATTGCAGCTGAAGAATTTAAGAAGTGGAATAATGTGGCTATAATGTTGAGTTGGGCTGTCCTATATAGGATTTTGTTTTACATAATTATTCCAGTCACTGTTTTATCTGTTCCTTCGTTTCTATTGCATTTTGCAACAAGCTCACAAGAGTGTGCGTCACATCCCTCCCACAGTAAGATAATGATGGAGGAATTGGATAACTGGATATTAAGACTTGTTACGGTTCATGTCCTTTTCCTCTTTGGATTTATCAGATCGACTTCTGCAAGTGAAGGGTTTGTGAGCATAGCATGCTGTGCTGATCCAAATTATACAGATCCAAAGACTTCTTTGAATTACACATCAGATTACAGTTTCTTCTCAGATAGAACAAGTTGCCGAGACATAACCGAGCCTGTGGAAAACCATGCAGGCTATGAAAGAGCTCGAGTGTTTGATATAGATGAAGGGAAAAGATGTTATAACTTGCCCACAATTAAGGATCAAGTATATCTGTTAAGGGGCACATTCCCATTTGATGATTCACTGAGCGATTCTTCCTTTAATGTTACAATTGGTGTAACATCATTAGGTGAAGTAGAGTCTCCATACCAGGACTTGAAAATTGAGGGAATTTTCAGAGCTACAAAGAACTACATAGACTTCTGCTTAGTGAAGGAGGAGGGAAGTCCTTACATTTCACAGCTTGAATTGAGGCCATTGCATGAAGAGTACCTACAGGGTTTCCCTTCGAGTGTCTTAAAACTGTTCAGCAGAAATAACCTAGGGGGCACTGGAGACGACATAAGGTACCCACTTGACCAAAGTGACAGAATCTGGAAAGTTACTTCGAGTCCATCCTATGCTTCCATATCATTCAATGTGAGCATTTCCGGCCACAATGCTAACGCCACACCTCCTCTACAAGTCTTACAAACAGCTCTTACCCATCCTGAGCGATTGGAATTCATCCACAATGGCCCCAAGACTGGGAATTACAAATACCTTGTGTTTCTCTACTTTCTTGAATTAAACGAGAGTCTCAGACTAGGCCAAAGGGTGTTTGACATATATGTCAACAGCGAGATCAAAGAGCGGAGGTTTGACATATTTGCTGGTGGTTTGAACTTCAGATACACTGTCTTGAACGTTTCAGCAAATGGGTCAATCAATATGACCTTGATCAAAGCATCTGGGTCTGAGTTTGGACCCCTTTGTAATGCATACGAGATCCTGCAGGTGTTACCATGGATGAAAGAGACCAACCAAACAGACTTGAAAGTGATCTTGAAGTTGAGAGAACAGTTGTTGGAGAAGAACCGAGGCAATAAAGCACTGGAGAGTTGGACTGGGGACCCCTGTATTCCTTTCCCCTGGCAGCATGTAGGATGTGATCCTTTTAATGGTTCATCTGTTATCAAGAAGCTGGATCTTTCTTCAAGTAATCTCAAAGGACCAATTCCTTCCAGTGTCACTGAATTGACCAACTTAAAAATATTGAACCTGAGCTACAACAGCTTCAATAGCAGTATCCCCTCATTTCCGCCTTCCTCTTTGCTGACATCAGTAGATATGAGCCACAATGATCTTATAGGATCACTTCCAGGGACAATTACCTCACTACCACAGCTACAGTTCTTGTATTTTGGTTGCAATAAACGTATGAAGAAAGAGGTTTCACCTAACTTGAACAGTTCACTCAATACAGATTATGGAAGATGCAAAGATCAAGAGAAAGGAAATCCAGAAAAACAAATCATCATTGGCACTGTTACATGTGGATTACTGTTGCTTATTTTGGCTATTGGAATTCTTTTTGCTTGCCGTTATAGAGAAAAATTAATTCCTTGGGGAACATTTGATGGAAAGGGATACCCAACGGCAACAAATTTAATTTTCTCTTTCCCCAGTAAAGATGATTTCTTCACGAAGTCGCTATCTATTCAAACATTCACTTTGGAATACATAGAGACAGCCACCGAAAAGTATAAAACTTTAATAGGTGAAGGAGGGTTTGGGTCTGTTTACCGGGGCACTCTAGAAGATGGTCAAGAAGTGGCAGTGAAGGTCCGTTCAGCCACATCAACTCAGGGAACGCGAGAATTCGACAACGAGCTAAACCTGCTTTCTGCTATACGGCATGAGAACCTGGTGCCTCTTATTGGTTACTGTAATGAAAATGATCAACAAATTCTAGTGTATCCATTTATGTCGAATGGCTCTTTACAAGATAGACTTTATGGGGAACCATCAAAGAGAAAAGTATTAGACTGGCCAACCAGGCTATCTATTGCCCAGGGCGCTGCTCGAGGTTTGTCTTATCTTCACACATTTTCGGGACGTTCCGTTATACATAGAGATGTAAAATCAAGCAATATACTTCTGGATCACAGCATGTGTGCTAAGGTAGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTGGTGCTTCTCTTGAAGTAAGAGGAACCGCAGGATATATGGATCCTGAATACTACACAACCCAGCAATTATCTGCAAAGAGTGATGTCTTCAGCTTTGGCGTGGTTCTACTTGAAATTGTGAGTGGTAGGGAACCTCTCAACATACATAGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCTAAATCAAATATAAGGGCGGCAAAGATGGAAGAAATTGTGGATCCTGGCATCAAGGGAGGGTATCATGCAGAGGCTATGTGGAGAGTGGTGGAAGTAGCACTGACATGTATTGAACCGTTGTCAGCACATCGACCAAGCATGGATGACATTGTCCGTGAGTTGGAGGATGCTCTAATTATAGAAAACAATGCATCTGAATACATGAAGTCTATAGAAAGCCTTGGAGGATCTAATCGCTACTCCATTGTCATAGAGACAAAGGTGCTGCCCCCAACTCCATCTACAATGGAATCAACCATCTCCGCCAAAACGTTGTCCCTCCCAGAGCCGAGATAG 5019 0.4377 MAQANGRRDATVIDIKRSTNFTGGLEFSDLTYTVTKKKEVDGNWLNEEVDLLHQITGYAPKGCVTAVMGPSGAGKSTFLDGLAGKIASGSLKGSVFLDGIATSPSLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLGPLSIADKKQRVEKLIEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKVHDIARSGSTVVLTIHQPSSRIQLLLDHLIILARGQLMYQGAPKDVGLHLKRMGRRVPKGENPIENLIDVIQEYDQSEVGVGALAEFARTGVKPPPLSDQELSLSTVAPSTPAPNRSHHGRHQRLGDDEKSEEISHSQISRRIADDFDHSVRSTHGIPKSWSTSNSAVFRKFTPSRPKNDQKVQNPVSNSSPGYYTYSSEILPATPTPHSSDYTVNENDYLTPPTAMPKNLGPKFANSFFKETWILMRRNFINIRRTPELFLSRLMVLTVMGFMMATMFKNPKPNLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIASLITHTPFLALQALVYAVIVWFALKLEGPFLYFFIILFVSLVTTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSKDIPSYWRWMNKISTMTYPYEGLLMNQYQTEDVFGTNLDGSLVTGFDILKGLHIAAEEFKKWNNVAIMLSWAVLYRILFYIIIPVTVLSVPSFLLHFATSSQECASHPSHSKIMMEELDNWILRLVTVHVLFLFGFIRSTSASEGFVSIACCADPNYTDPKTSLNYTSDYSFFSDRTSCRDITEPVENHAGYERARVFDIDEGKRCYNLPTIKDQVYLLRGTFPFDDSLSDSSFNVTIGVTSLGEVESPYQDLKIEGIFRATKNYIDFCLVKEEGSPYISQLELRPLHEEYLQGFPSSVLKLFSRNNLGGTGDDIRYPLDQSDRIWKVTSSPSYASISFNVSISGHNANATPPLQVLQTALTHPERLEFIHNGPKTGNYKYLVFLYFLELNESLRLGQRVFDIYVNSEIKERRFDIFAGGLNFRYTVLNVSANGSINMTLIKASGSEFGPLCNAYEILQVLPWMKETNQTDLKVILKLREQLLEKNRGNKALESWTGDPCIPFPWQHVGCDPFNGSSVIKKLDLSSSNLKGPIPSSVTELTNLKILNLSYNSFNSSIPSFPPSSLLTSVDMSHNDLIGSLPGTITSLPQLQFLYFGCNKRMKKEVSPNLNSSLNTDYGRCKDQEKGNPEKQIIIGTVTCGLLLLILAIGILFACRYREKLIPWGTFDGKGYPTATNLIFSFPSKDDFFTKSLSIQTFTLEYIETATEKYKTLIGEGGFGSVYRGTLEDGQEVAVKVRSATSTQGTREFDNELNLLSAIRHENLVPLIGYCNENDQQILVYPFMSNGSLQDRLYGEPSKRKVLDWPTRLSIAQGAARGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWAKSNIRAAKMEEIVDPGIKGGYHAEAMWRVVEVALTCIEPLSAHRPSMDDIVRELEDALIIENNASEYMKSIESLGGSNRYSIVIETKVLPPTPSTMESTISAKTLSLPEPR 1672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0992 1672 CDD STKc_IRAK 1349 1616 - -
Glsi05g0992 1672 Pfam Malectin-like domain 789 1096 IPR024788 -
Glsi05g0992 1672 MobiDBLite consensus disorder prediction 315 329 - -
Glsi05g0992 1672 FunFam Nodulation receptor kinase 1310 1418 - -
Glsi05g0992 1672 ProSitePatterns Protein kinases ATP-binding region signature. 1349 1371 IPR017441 GO:0005524
Glsi05g0992 1672 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Glsi05g0992 1672 Pfam Protein tyrosine and serine/threonine kinase 1346 1615 IPR001245 GO:0004672|GO:0006468
Glsi05g0992 1672 CDD ABCG_EPDR 25 257 - -
Glsi05g0992 1672 SUPERFAMILY L domain-like 1127 1237 - -
Glsi05g0992 1672 SUPERFAMILY Protein kinase-like (PK-like) 1323 1615 IPR011009 -
Glsi05g0992 1672 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 275 IPR003439 GO:0005524
Glsi05g0992 1672 Gene3D - 25 269 IPR027417 -
Glsi05g0992 1672 MobiDBLite consensus disorder prediction 307 363 - -
Glsi05g0992 1672 SMART AAA_5 61 260 IPR003593 GO:0016887
Glsi05g0992 1672 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 1419 1628 - -
Glsi05g0992 1672 Gene3D - 938 1096 - -
Glsi05g0992 1672 Gene3D Transferase(Phosphotransferase) domain 1 1419 1632 - -
Glsi05g0992 1672 ProSiteProfiles Protein kinase domain profile. 1343 1620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0992 1672 FunFam ABC transporter G family member 6 35 273 - -
Glsi05g0992 1672 SMART serkin_6 1343 1620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0992 1672 Gene3D Phosphorylase Kinase; domain 1 1315 1418 - -
Glsi05g0992 1672 Gene3D Ribonuclease Inhibitor 1104 1257 IPR032675 -
Glsi05g0992 1672 MobiDBLite consensus disorder prediction 336 363 - -
Glsi05g0992 1672 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Glsi05g0992 1672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 262 IPR027417 -
Glsi05g0992 1672 PANTHER OS07G0107800 PROTEIN-RELATED 783 1619 - -
Glsi05g0992 1672 Pfam ABC-2 type transporter 459 664 IPR013525 GO:0016020|GO:0140359
Glsi05g0992 1672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1465 1477 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0992 Glsi-ChrGlsi05 59952213 59965180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0992 759 1622 Receptor kinase-like Gene Family AT1G67720 35.281 3.53e-132 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi05g0992 Malectin_like 5.2e-50 CL0202